RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 MBD3L3A6NE82 208 aaPredicted RBP10.7□□□□□ -0.7
ITSN1-208ENST00000399349 MBD3L5A6NJ08 208 aaPredicted RBP10.7□□□□□ -0.7
ITSN1-208ENST00000399349 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
ITSN1-208ENST00000399349 MBD3L2Q8NHZ7 208 aaPredicted RBP10.7□□□□□ -0.7
ITSN1-208ENST00000399349 FAM90A2PQ658T7 463 aa10.7□□□□□ -0.7
ITSN1-208ENST00000399349 COL4A6Q14031 1691 aa10.7□□□□□ -0.7
ITSN1-208ENST00000399349 A0A087WWL8 130 aa10.7□□□□□ -0.7
ITSN1-208ENST00000399349 RPL35AP18077 110 aaKnown RBP10.7□□□□□ -0.7
ITSN1-208ENST00000399349 SPSB3Q6PJ21 355 aa10.7□□□□□ -0.7
ITSN1-208ENST00000399349 A0A087WX48 190 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 ERVK11-1P61568 191 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 ZNF524Q96C55 264 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 LYL1P12980 280 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 ERCC8Q13216 396 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 UNQ6494/PRO21346Q6UXR6 183 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 MAPK1IP1LQ8NDC0 245 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 TRBV6-6A0A0A6YYG2 114 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 HSD52Q0P140 79 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 OVOL3O00110 214 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 PIP4P2Q8N4L2 257 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 C1orf159Q96HA4 380 aa10.69□□□□□ -0.7
ITSN1-208ENST00000399349 POLR3KQ9Y2Y1 108 aaPredicted RBP10.69□□□□□ -0.7
ITSN1-208ENST00000399349 LTBP1Q14766 1721 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 A0A1W2PPI3 338 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 SAA4P35542 130 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 ZC2HC1BQ5TFG8 222 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 CHD3Q12873 2000 aaKnown RBP10.68□□□□□ -0.7
ITSN1-208ENST00000399349 UBE2V1Q13404 147 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 Q6ZS92 163 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 VWA8A3KMH1 1905 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 E7EQL1 145 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 PSG3Q16557 428 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 TMEM158Q8WZ71 300 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 CUL9Q8IWT3 2517 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 B4DSR2 109 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 DUX4L9Q6RFH8 374 aaPredicted RBP10.68□□□□□ -0.7
ITSN1-208ENST00000399349 MTURNQ8N3F0 131 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 RHPN1-AS1Q9BWJ2 59 aa10.68□□□□□ -0.7
ITSN1-208ENST00000399349 MED13Q9UHV7 2174 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 SLC25A20O43772 301 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 OR9G4Q8NGQ1 327 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 CRPP02741 224 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 MINOS1Q5TGZ0 78 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 PHLDA1Q8WV24 401 aaPredicted RBP10.67□□□□□ -0.7
ITSN1-208ENST00000399349 MINOS1-NBL1R4GNA1 71 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 PTPN13Q12923 2485 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 LCNL1Q6ZST4 164 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 C9orf139Q6ZV77 190 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 A8MWV9 139 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 GAGE13Q4V321 117 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 CSTL1Q9H114 145 aa10.67□□□□□ -0.7
ITSN1-208ENST00000399349 ARMS2P0C7Q2 107 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 M0R2P5 195 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 IGHG3P01860 377 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 PRTN3P24158 256 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 CKS1BP61024 79 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 SEC11AP67812 179 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 WDR90Q96KV7 1748 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 PAX4O43316 350 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 RUSC1-AS1Q66K80 236 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 GATD1Q8NB37 220 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 LIME1Q9H400 295 aa10.66□□□□□ -0.7
ITSN1-208ENST00000399349 TRAV13-1A0A0B4J241 112 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 KNCNA6PVL3 124 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 SYS1-DBNDD2H3BUS1 97 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 SYNJ2BPP57105 145 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 KLHL30-AS1Q8NEE0 82 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 CYYR1Q96J86 154 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 MS4A6AQ9H2W1 248 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 FOXL2NBQ6ZUU3 175 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 RNF5Q99942 180 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 GGTLC3B5MD39 225 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 ASCL4Q6XD76 172 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 STPG4Q8N801 248 aa10.65□□□□□ -0.7
ITSN1-208ENST00000399349 PFN1P07737 140 aaKnown RBP10.65□□□□□ -0.71
ITSN1-208ENST00000399349 TMEM86BQ8N661 226 aa10.65□□□□□ -0.71
ITSN1-208ENST00000399349 S100A7L2Q5SY68 101 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 Q6ZS49 121 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
ITSN1-208ENST00000399349 OOSP1A8MZH6 123 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 RPL36AP83881 106 aaKnown RBP10.64□□□□□ -0.71
ITSN1-208ENST00000399349 RPL36ALQ969Q0 106 aaKnown RBP10.64□□□□□ -0.71
ITSN1-208ENST00000399349 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 ASPHD1Q5U4P2 390 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 Q6ZR03 302 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 C1orf147Q96MC9 270 aaPredicted RBP10.64□□□□□ -0.71
ITSN1-208ENST00000399349 JPT2Q9H910 190 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 TRBV7-1A0A0A6YYK4 115 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 Q86TA4 180 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 SMPXQ9UHP9 88 aa10.64□□□□□ -0.71
ITSN1-208ENST00000399349 G3V318 75 aa10.63□□□□□ -0.71
ITSN1-208ENST00000399349 TEX43Q6ZNM6 134 aa10.63□□□□□ -0.71
ITSN1-208ENST00000399349 C1orf122Q6ZSJ8 110 aa10.63□□□□□ -0.71
ITSN1-208ENST00000399349 CST9LQ9H4G1 147 aa10.63□□□□□ -0.71
ITSN1-208ENST00000399349 M0R1W7 72 aa10.63□□□□□ -0.71
ITSN1-208ENST00000399349 MORN3Q6PF18 240 aaPredicted RBP10.63□□□□□ -0.71
ITSN1-208ENST00000399349 C20orf144Q9BQM9 153 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms