RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 C3orf36Q3SXR2 165 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 CD7P09564 240 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 TRAV25A0A0B4J276 109 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 INS-IGF2F8WCM5 200 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 INSP01308 110 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 TMEM42Q69YG0 159 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 PAX1P15863 534 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 TRBV19A0A075B6N1 114 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 IGKV1-27A0A075B6S5 117 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 hADV29S1A0JD25 119 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 NDUFA7O95182 113 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 TCRAP04437 139 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 CRYGBP07316 175 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 CCL4P13236 92 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 HLA-DRB4P13762 266 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 HLA-DRB4X5D2U9 266 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 IGHV3-72A0A0B4J1Y9 119 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 TDRG1Q3Y452 100 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 KLF14Q8TD94 323 aaPredicted RBP7.85□□□□□ -1.15
SMAD9-203ENST00000399275 C10orf105Q8TEF2 133 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 DSCR8Q96T75 97 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 YPEL1O60688 119 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 RNF144BQ7Z419 303 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 PRIMA1Q86XR5 153 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 YPEL2Q96QA6 119 aa7.85□□□□□ -1.15
SMAD9-203ENST00000399275 IGKV1-5P01602 117 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 TREML4Q6UXN2 200 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 ZC2HC1AQ96GY0 325 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 IGLV3-12A0A075B6K2 115 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 C15orf61A6NNL5 157 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 BAALC-AS2P0C853 105 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 F8WEM9 126 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 ODF1Q14990 250 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 RPL39P5Q59GN2 51 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 ZNF474Q6S9Z5 364 aaPredicted RBP7.84□□□□□ -1.15
SMAD9-203ENST00000399275 ZNF837Q96EG3 531 aaPredicted RBP7.84□□□□□ -1.15
SMAD9-203ENST00000399275 ZNF318Q5VUA4 2279 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 CR1LQ2VPA4 569 aa7.84□□□□□ -1.15
SMAD9-203ENST00000399275 C1orf147Q96MC9 270 aaPredicted RBP7.84□□□□□ -1.15
SMAD9-203ENST00000399275 THBDP07204 575 aa7.84□□□□□ -1.16
SMAD9-203ENST00000399275 RNF152Q8N8N0 203 aa7.84□□□□□ -1.16
SMAD9-203ENST00000399275 SHISA2Q6UWI4 295 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 FAM231DQ6ZW35 169 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 DPH3Q96FX2 82 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 ICE1Q9Y2F5 2266 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 TIMM23O14925 209 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 BUB3O43684 328 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 CFHR2P36980 270 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 TANC1Q9C0D5 1861 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 PRR19A6NJB7 356 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
SMAD9-203ENST00000399275 RNASE4P34096 147 aaKnown RBP7.83□□□□□ -1.16
SMAD9-203ENST00000399275 CASP8AP2Q9UKL3 1982 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 HAX1O00165 279 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 VCYO14598 125 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 HOXD3P31249 432 aaPredicted RBP7.82□□□□□ -1.16
SMAD9-203ENST00000399275 FOXL2NBQ6ZUU3 175 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 IL17RELQ6ZVW7 336 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 LY6G5BQ8NDX9 201 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 GFRA4Q9GZZ7 299 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 SLC25A45Q8N413 288 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 TRGV8A0A0C4DH27 118 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 SPAARA0A1B0GVQ0 90 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 IGKV3-20P01619 116 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 IGLV3-19P01714 112 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 RCHY1Q96PM5 261 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 CCL13Q99616 98 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 NLRC5Q86WI3 1866 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 EFNA2O43921 213 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 LINC00643Q86TS7 51 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 C20orf197Q8N268 126 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 MYOFQ9NZM1 2061 aa7.82□□□□□ -1.16
SMAD9-203ENST00000399275 DOCK6Q96HP0 2047 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 TRGV11A0A075B6L2 103 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 SNRPD3P62318 126 aaKnown RBP7.81□□□□□ -1.16
SMAD9-203ENST00000399275 SHISA5Q8N114 240 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 CHD3Q12873 2000 aaKnown RBP7.81□□□□□ -1.16
SMAD9-203ENST00000399275 PTPRDP23468 1912 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 IGHV3OR16-13A0A075B7E8 117 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 IGHV3-74A0A0B4J1X5 117 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 IGHV3-35A0A0C4DH35 117 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 PCP2Q8IVA1 136 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 TCRBV4S1A1TA0A5B7 111 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 TM4SF5O14894 197 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 UCNP55089 124 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 LINC01620Q4KN68 170 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 SDK1Q7Z5N4 2213 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 CCDC179H3BU77 68 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 LINC00694P0DN24 101 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 PAX9P55771 341 aa7.81□□□□□ -1.16
SMAD9-203ENST00000399275 WIPF3A6NGB9 483 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 ADARB2-AS1A8MUL3 147 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 ZNF726P1Q15940 193 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 PYGO2Q9BRQ0 406 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 MRPL35Q9NZE8 188 aaKnown RBP7.8□□□□□ -1.16
SMAD9-203ENST00000399275 MAP1BP46821 2468 aaKnown RBP7.8□□□□□ -1.16
SMAD9-203ENST00000399275 A0A0G2JRQ6 117 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 SPATA31B1PQ5VZV4 182 aa7.8□□□□□ -1.16
SMAD9-203ENST00000399275 ITLN1Q8WWA0 313 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms