RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TRPM7Q96QT4 1865 aa-2.35□□□□□ -2.78
RNU6-239P-201ENST00000390990 CDK13Q14004 1512 aaKnown RBP-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 MCRIP1C9JLW8 97 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 F2Z2F3 143 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 CXCR6O00574 342 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 TGOLN2O43493 480 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 OR10J4P0C629 311 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 RAB5BP61020 215 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 ANKRD29Q8N6D5 301 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 CCL4L1Q8NHW4 92 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 ISOC1Q96CN7 298 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 ZNF714Q96N38 554 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 DSCR8Q96T75 97 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 NBPF19A0A087WUL8 3843 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 KIAA1109Q2LD37 5005 aa-2.35□□□□□ -2.79
RNU6-239P-201ENST00000390990 TRGV10A0A0A0MS01 117 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 EEF1E1-BLOC1S5C9J1V9 151 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 SLC16A4O15374 487 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 PIAS1O75925 651 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 SRIP30626 198 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 RAB5CP51148 216 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 EIF5AP63241 154 aaKnown RBP-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 SDHAF4Q5VUM1 108 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 SFXN4Q6P4A7 337 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 OR51D1Q8NGF3 324 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 C19orf60Q96EN9 201 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 HYLS1Q96M11 299 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 POPDC3Q9HBV1 291 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 MRPL35Q9NZE8 188 aaKnown RBP-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 PRO0255Q9UI72 69 aa-2.36□□□□□ -2.79
RNU6-239P-201ENST00000390990 A0A087WTM6 91 aa-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 F8VZ95 297 aa-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 RPL5P46777 297 aaKnown RBP-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 OR5D16Q8NGK9 328 aa-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 STAG3L4Q8TBR4 150 aa-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 FAM172AQ8WUF8 416 aa-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 BPESC1Q9GZL8 116 aa-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 RABL2AQ9UBK7 228 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 NCOA1Q15788 1441 aa-2.37□□□□□ -2.79
RNU6-239P-201ENST00000390990 K7EQZ3 153 aa-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 GYPBP06028 91 aa-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 SNRPD3P62318 126 aaKnown RBP-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 KLK9Q2XQG4 91 aa-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 CLVS2Q5SYC1 327 aa-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 C22orf39Q6P5X5 142 aa-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 LRRC18Q8N456 261 aa-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 MSANTD3Q96H12 275 aa-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 ROBO3Q96MS0 1386 aa-2.38□□□□□ -2.79
RNU6-239P-201ENST00000390990 MYH9P35579 1960 aaKnown RBP-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 NUP98P52948 1817 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 GVQW2A0A096LPI5 108 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 A0A0G2JMM0 328 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 A0A1W2PPB8 328 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 KIR3DP1A8MWS1 328 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 LOC730098B7Z3J9 87 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 CRYZL1O95825 349 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 PET100P0DJ07 73 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 MYL12AP19105 171 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 HIST1H1TP22492 207 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 SRP14P37108 136 aaKnown RBP-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 COPS6Q7L5N1 327 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 C20orf196Q8IYI0 205 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 OR52E6Q96RD3 313 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 OR51I1Q9H343 314 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 BIN3Q9NQY0 253 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 MUC17Q685J3 4493 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 PLCE1Q9P212 2302 aa-2.39□□□□□ -2.79
RNU6-239P-201ENST00000390990 hDV103S1A0JD37 113 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 NDUFS8O00217 210 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 RBP1P09455 135 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 OR5G3P0C626 314 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 SULT1A1P50225 295 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 NEDD8Q15843 81 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 CSAG1Q6PB30 78 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 KRT222Q8N1A0 295 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 C2orf50Q96LR7 162 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 CNFNQ9BYD5 112 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 LAMC1P11047 1609 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 PCNX1Q96RV3 2341 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 BIRC6Q9NR09 4857 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 SSC5DA1L4H1 1573 aa-2.4□□□□□ -2.79
RNU6-239P-201ENST00000390990 WRNQ14191 1432 aaPredicted RBP eCLIP-2.41□□□□□ -2.79
RNU6-239P-201ENST00000390990 DUXBA0A1W2PPF3 345 aa-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 AP3S2P59780 193 aa-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 RANP62826 216 aaKnown RBP-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 KRR1Q13601 381 aaKnown RBP-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 SPOPLQ6IQ16 392 aa-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 C12orf45Q8N5I9 185 aaPredicted RBP-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 PIGXQ8TBF5 258 aa-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 CHCHD1Q96BP2 118 aaKnown RBP-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 ZHX1-C8orf76Q96EF9 292 aa-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 PPP1R2P1Q96PQ5 205 aa-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 PKIGQ9Y2B9 76 aa-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 RREB1Q92766 1687 aa-2.41□□□□□ -2.8
RNU6-239P-201ENST00000390990 PFDN6O15212 129 aa-2.42□□□□□ -2.8
RNU6-239P-201ENST00000390990 SSNA1O43805 119 aa-2.42□□□□□ -2.8
RNU6-239P-201ENST00000390990 MYL5Q02045 173 aa-2.42□□□□□ -2.8
RNU6-239P-201ENST00000390990 GRPEL2Q8TAA5 225 aa-2.42□□□□□ -2.8
RNU6-239P-201ENST00000390990 SLC35B4Q969S0 331 aa-2.42□□□□□ -2.8
RNU6-239P-201ENST00000390990 YPEL2Q96QA6 119 aa-2.42□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms