RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 A4D1N5 150 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 H7C0C1 242 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 OR2J2O76002 312 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CALCBP10092 127 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CAPZBP47756 277 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ATP5OP48047 213 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 GCLMP48507 274 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CUL4AQ13619 759 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 AARDQ4LEZ3 155 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 KRBOX4Q5JUW0 171 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 UQCC3Q6UW78 93 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 STX12Q86Y82 276 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TUSC5Q8IXB3 177 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 VKORC1L1Q8N0U8 176 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 STX19Q8N4C7 294 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 EIF1ADQ8N9N8 165 aaKnown RBP-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 POP5Q969H6 163 aaKnown RBP-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CNBD2Q96M20 576 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SCGB3A2Q96PL1 93 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SLC29A1Q99808 456 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ERP44Q9BS26 406 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TMEM216Q9P0N5 145 aa-4.08□□□□□ -3.06
RNU6-1340P-201ENST00000384438 PLXNC1O60486 1568 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 FAM240AA0A1B0GVK7 77 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 RAB29O14966 203 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ARL2P36404 184 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TMEM33P57088 247 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 OR10A3P58181 314 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CCL20P78556 96 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 BFSP1Q12934 665 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 LPCAT3Q6P1A2 487 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 C20orf196Q8IYI0 205 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 TCTEX1D1Q8N7M0 179 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 BCORP1Q8N888 145 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SLC25A40Q8TBP6 338 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 SLAMF6Q96DU3 332 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 ZHX1-C8orf76Q96EF9 292 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 HYLS1Q96M11 299 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 CST11Q9H112 138 aa-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 UTP11Q9Y3A2 253 aaKnown RBP-4.09□□□□□ -3.06
RNU6-1340P-201ENST00000384438 DNMBPQ6XZF7 1577 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 NUP155O75694 1391 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 FAM236AA0A1B0GUQ0 79 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 FAM236BA0A1B0GV22 79 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 A8MWV9 139 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 OR2H2O95918 312 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 CD160O95971 181 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 OR4E1P0C645 316 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 RPL23AP62750 156 aaKnown RBP-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 VSNL1P62760 191 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 ITGB3BPQ13352 177 aaPredicted RBP-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 GPM6BQ13491 265 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 HIST3H3Q16695 136 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 IAH1Q2TAA2 248 aaPredicted RBP-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 CENPWQ5EE01 88 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 CFAP58Q5T655 872 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 LRRN1Q6UXK5 716 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 ERASQ7Z444 233 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 BAGE3Q86Y29 109 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 TMEM161BQ8NDZ6 487 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 LEAP2Q969E1 77 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 CCL13Q99616 98 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 COA1Q9GZY4 146 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 METTL8Q9H825 291 aaKnown RBP-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 RAB18Q9NP72 206 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 TAGLN3Q9UI15 199 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 PARP14Q460N5 1801 aa-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 TNRC6CQ9HCJ0 1690 aaKnown RBP-4.1□□□□□ -3.07
RNU6-1340P-201ENST00000384438 ATP7BP35670 1465 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 NPATQ14207 1427 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 A0A087X0M5 115 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 A0A1B0GX30 115 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 K7EP13 123 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 LST1O00453 97 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 WBP4O75554 376 aaKnown RBP-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 SNAP29O95721 258 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 SRP19P09132 144 aaKnown RBP-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 S100A5P33763 92 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 ARF3P61204 181 aaPredicted RBP-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 ARF1P84077 181 aaKnown RBP-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 PDZK1Q5T2W1 519 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 SCD5Q86SK9 330 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 LRRC18Q8N456 261 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 OR4B1Q8NGF8 309 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 SVIPQ8NHG7 77 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 CENPNQ96H22 339 aaPredicted RBP-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 SLC22A4Q9H015 551 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 IQCGQ9H095 443 aaKnown RBP-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 POLE4Q9NR33 117 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 ENPP5Q9UJA9 477 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 ATP10BO94823 1461 aa-4.11□□□□□ -3.07
RNU6-1340P-201ENST00000384438 LRPPRCP42704 1394 aaKnown RBP-4.12□□□□□ -3.07
RNU6-1340P-201ENST00000384438 DHX29Q7Z478 1369 aaKnown RBP-4.12□□□□□ -3.07
RNU6-1340P-201ENST00000384438 PIK3C2AO00443 1686 aa-4.12□□□□□ -3.07
RNU6-1340P-201ENST00000384438 IGLV5-48A0A075B6I7 105 aa-4.12□□□□□ -3.07
RNU6-1340P-201ENST00000384438 GOLGA8SH3BPF8 625 aa-4.12□□□□□ -3.07
RNU6-1340P-201ENST00000384438 M0QZ58 72 aa-4.12□□□□□ -3.07
RNU6-1340P-201ENST00000384438 GMFGO60234 142 aa-4.12□□□□□ -3.07
RNU6-1340P-201ENST00000384438 GFAPP14136 432 aa-4.12□□□□□ -3.07
RNU6-1340P-201ENST00000384438 GABRR2P28476 465 aa-4.12□□□□□ -3.07
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms