RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 IGF2RP11717 2491 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 LIMS2Q7Z4I7 341 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 C5orf64Q2M2E5 130 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 CELA3AP09093 270 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 PRTN3P24158 256 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 PMVKQ15126 192 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 SERF1AO75920 110 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 ID3Q02535 119 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 WFDC6Q9BQY6 131 aa9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 NPDC1Q9NQX5 325 aaPredicted RBP9.27□□□□□ -0.93
PTCHD1-201ENST00000379361 LINC00271P0C7V0 271 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 RFLNBQ8N5W9 214 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 MRPL52Q86TS9 123 aaKnown RBP9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 C14orf178Q8N769 122 aaPredicted RBP9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 NMBP08949 121 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 ZNF672Q499Z4 452 aaPredicted RBP9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 D6R8Y8 96 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 RBM38Q9H0Z9 239 aaKnown RBP9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 A0A0G2JMZ2 1700 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 LRRC37A2A6NM11 1700 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 LRRC37AA6NMS7 1700 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 TRPT1Q86TN4 253 aaKnown RBP9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 SMIM2Q9BVW6 85 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 UNQ6494/PRO21346Q6UXR6 183 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 TMEM158Q8WZ71 300 aa9.26□□□□□ -0.93
PTCHD1-201ENST00000379361 KLF5Q13887 457 aaPredicted RBP9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 PMS2P5A8MQ11 134 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 LHX2P50458 406 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 SEC61GP60059 68 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 SPATA31B1PQ5VZV4 182 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 MSRB2Q9Y3D2 182 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 IGKV2-40A0A087WW87 121 aaPredicted RBP9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 IGKV2D-40P01614 121 aaPredicted RBP9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 A0A0G2JMM0 328 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 A0A1W2PPB8 328 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 A0A1W2PRS3 328 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 KIR3DP1A8MWS1 328 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 CD24P25063 80 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 SRSF8Q9BRL6 282 aaKnown RBP9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 SLAQ13239 276 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 EFNB3Q15768 340 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 ADMP35318 185 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 C18orf12Q96KH6 178 aa9.25□□□□□ -0.93
PTCHD1-201ENST00000379361 RAMP3O60896 148 aa9.24□□□□□ -0.93
PTCHD1-201ENST00000379361 F8VVB4 439 aa9.24□□□□□ -0.93
PTCHD1-201ENST00000379361 F8VWA3 439 aa9.24□□□□□ -0.93
PTCHD1-201ENST00000379361 CFHR1Q03591 330 aa9.24□□□□□ -0.93
PTCHD1-201ENST00000379361 IGHV1-8P0DP01 117 aa9.24□□□□□ -0.93
PTCHD1-201ENST00000379361 IGFBP3P17936 291 aaPredicted RBP9.24□□□□□ -0.93
PTCHD1-201ENST00000379361 IFITM3Q01628 133 aa9.24□□□□□ -0.93
PTCHD1-201ENST00000379361 ZNF124Q15973 351 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 GNLYP22749 145 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 ZNF503Q96F45 646 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 PRSS29PA6NIE9 313 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 TMEM178BH3BS89 294 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 PSG7Q13046 419 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 RPRMLQ8N4K4 120 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 STPG4Q8N801 248 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 PPIFP30405 207 aaKnown RBP9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 FBLIM1Q8WUP2 373 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 WDR90Q96KV7 1748 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 TPTE2P1Q5T6R2 138 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 TMEM141Q96I45 108 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 IGHV1-3A0A0C4DH29 117 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 LINC01619G3V211 115 aa9.23□□□□□ -0.93
PTCHD1-201ENST00000379361 H3BQ85 93 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 PRB3Q04118 309 aaPredicted RBP9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 NEGR1Q7Z3B1 354 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 GSN-AS1Q9NRJ2 163 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 RFNGQ9Y644 331 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 PYYP10082 97 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 A0A087WWL8 130 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 FAM110DQ8TAY7 271 aaPredicted RBP9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 A0A1B0GWJ7 208 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 ATP5G3P48201 142 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 PPP1R3EQ9H7J1 279 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 TMEM170AQ8WVE7 144 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 SPXQ9BT56 116 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 MSMBP08118 114 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 EIF4EBP2Q13542 120 aaPredicted RBP9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 AZU1P20160 251 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 SPRED2Q7Z698 418 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 SPRR3Q9UBC9 169 aa9.22□□□□□ -0.93
PTCHD1-201ENST00000379361 C1QTNF9P0C862 333 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 FBLN5Q9UBX5 448 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 EFNA2O43921 213 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 MDS2Q8NDY4 140 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 UTF1Q5T230 341 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 MRPL14Q6P1L8 145 aaKnown RBP9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 LINC00527Q9UJ94 153 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 CFHR2P36980 270 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 TRBV5-3A0A0A0MS03 114 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 IGLV3-21P80748 117 aaPredicted RBP9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 C1orf122Q6ZSJ8 110 aa9.21□□□□□ -0.93
PTCHD1-201ENST00000379361 TIAF1O95411 115 aa9.21□□□□□ -0.94
PTCHD1-201ENST00000379361 IGHV1-46P01743 117 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms