RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FBN2P35556 2912 aa11□□□□□ -0.65
HMGCL-203ENST00000374490 A0A1B0GW15 77 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 C20orf202A1L168 122 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 IGLC2P0DOY2 106 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 NTF3P20783 257 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 PDE6HQ13956 83 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 ZNF562Q6V9R5 426 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 LINC00322Q6ZN03 302 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-203ENST00000374490 GOLT1AQ6ZVE7 132 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 DTX2Q86UW9 622 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 ARL6IP6Q8N6S5 226 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 ZNF491Q8N8L2 437 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
HMGCL-203ENST00000374490 SGK494Q96LW2 274 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 UBTD1Q9HAC8 227 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 THYN1Q9P016 225 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 F8P00451 2351 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 ABCA4P78363 2273 aa10.99□□□□□ -0.65
HMGCL-203ENST00000374490 H3BTX0 84 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 M0R2Z0 102 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 HAX1O00165 279 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 GNG7O60262 68 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 IGLV2-11P01706 119 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 CTRLP40313 264 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 FOXA3P55318 350 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-203ENST00000374490 LDLRAD2Q5SZI1 272 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 Q6AWC8 147 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
HMGCL-203ENST00000374490 LHFPL4Q7Z7J7 247 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 PRNTQ86SH4 94 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 TTC9CQ8N5M4 171 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 GTSF1Q8WW33 167 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 PGLYRP4Q96LB8 373 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 UQCR10Q9UDW1 63 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 HILPDAQ9Y5L2 63 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 CSMD2Q7Z408 3487 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 IGLV11-55A0A075B6I3 123 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 FBLL1A6NHQ2 334 aaKnown RBP10.98□□□□□ -0.65
HMGCL-203ENST00000374490 A6NNC1 897 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 VWC2LB2RUY7 222 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 CHEK1O14757 476 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 TCAPO15273 167 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 IL4P05112 153 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 EBI3Q14213 229 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 HES1Q14469 280 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 SPATA45Q537H7 98 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 SIGLEC15Q6ZMC9 328 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 EXOC3-AS1Q8N2X6 119 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 OR2D3Q8NGH3 330 aa10.98□□□□□ -0.65
HMGCL-203ENST00000374490 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-203ENST00000374490 FAM181BA6NEQ2 426 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 GOSR1O95249 250 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 RIGQ13278 110 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 FAM19A2Q8N3H0 131 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 AAMDCQ9H7C9 122 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 PSG8Q9UQ74 426 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 C2CD3Q4AC94 2353 aa10.97□□□□□ -0.65
HMGCL-203ENST00000374490 MRPS12O15235 138 aaKnown RBP10.96□□□□□ -0.65
HMGCL-203ENST00000374490 RPLP1P05386 114 aaKnown RBP10.96□□□□□ -0.65
HMGCL-203ENST00000374490 BTF3P20290 206 aaKnown RBP10.96□□□□□ -0.65
HMGCL-203ENST00000374490 PSG9Q00887 426 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 KLRD1Q13241 179 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 PSG3Q16557 428 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 ASPHD1Q5U4P2 390 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 VMO1Q7Z5L0 202 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 CIARTQ8N365 385 aaPredicted RBP10.96□□□□□ -0.65
HMGCL-203ENST00000374490 Q8N6K4 173 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 ZNF414Q96IQ9 312 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 TXN2Q99757 166 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 NDFIP1Q9BT67 221 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 C1RLQ9NZP8 487 aa10.96□□□□□ -0.65
HMGCL-203ENST00000374490 LOC102724200A0A096LPH7 203 aaPredicted RBP10.95□□□□□ -0.66
HMGCL-203ENST00000374490 A0A1W2PPR1 153 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 FCGR2BP31994 310 aaPredicted RBP10.95□□□□□ -0.66
HMGCL-203ENST00000374490 CSN1S1P47710 185 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 FANCD2OSQ96PS1 177 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 C21orf62Q9NYP8 219 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 POLQO75417 2590 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 PDZD2O15018 2839 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 A0A1B0GUT8 65 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 OR5AL1P0C617 328 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 Q56UQ5 140 aa10.95□□□□□ -0.66
HMGCL-203ENST00000374490 NAV3Q8IVL0 2385 aa10.94□□□□□ -0.66
HMGCL-203ENST00000374490 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.94□□□□□ -0.66
HMGCL-203ENST00000374490 TRAV8-1A0A0A6YYK1 113 aa10.94□□□□□ -0.66
HMGCL-203ENST00000374490 LY6HO94772 140 aa10.94□□□□□ -0.66
HMGCL-203ENST00000374490 CT45A10P0DMU9 189 aa10.94□□□□□ -0.66
HMGCL-203ENST00000374490 RPL7P18124 248 aaKnown RBP10.94□□□□□ -0.66
HMGCL-203ENST00000374490 CCDC168Q8NDH2 2452 aa10.94□□□□□ -0.66
HMGCL-203ENST00000374490 ZC2HC1AQ96GY0 325 aa10.94□□□□□ -0.66
HMGCL-203ENST00000374490 ADGRG4Q8IZF6 3080 aa10.93□□□□□ -0.66
HMGCL-203ENST00000374490 TRAV9-2A0A087WT02 112 aa10.93□□□□□ -0.66
HMGCL-203ENST00000374490 APOHP02749 345 aaPredicted RBP10.93□□□□□ -0.66
HMGCL-203ENST00000374490 IGLC3P0DOY3 106 aa10.93□□□□□ -0.66
HMGCL-203ENST00000374490 TMEM11P17152 192 aa10.93□□□□□ -0.66
HMGCL-203ENST00000374490 KRTAP21-3Q3LHN1 58 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms