RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 AHCTF1Q8WYP5 2266 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 CSN1S1P47710 185 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 CRYBA4P53673 196 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 TM2D2Q9BX73 214 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 TRBV25-1A0A075B6N4 114 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 SMCPP49901 116 aaPredicted RBP9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 MRPL51Q4U2R6 128 aaKnown RBP9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 TMEM167AQ8TBQ9 72 aa9.2□□□□□ -0.94
SMARCA1-201ENST00000371121 APELAP0DMC3 54 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 AP1S3Q96PC3 154 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 TRBV6-1A0A0K0K1D8 114 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 IGLL5B9A064 214 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 MRPS12O15235 138 aaKnown RBP9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 SMIM13P0DJ93 91 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 ETDBQ3ZM63 59 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 HCP5Q6MZN7 132 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 FA2HQ7L5A8 372 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 HIGD1BQ9P298 99 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 CELSR1Q9NYQ6 3014 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 FAM104BQ5XKR9 115 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 C6orf15Q6UXA7 325 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 OSR1Q8TAX0 266 aaPredicted RBP9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 IFI27L1Q96BM0 104 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 LINC00312Q9Y6C7 94 aa9.19□□□□□ -0.94
SMARCA1-201ENST00000371121 GCSHP23434 173 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 LYZL1Q6UWQ5 148 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 NFE4Q86UQ8 179 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 ZNF414Q96IQ9 312 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 VSTM5A8MXK1 200 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 PMS2CLQ68D20 193 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 SIGLEC15Q6ZMC9 328 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 RBMXL3Q8N7X1 1067 aaKnown RBP9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 C8orf46Q8TAG6 207 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 RNF185Q96GF1 192 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 TRGV9Q99603 122 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 TMEM164Q5U3C3 297 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 C22orf34Q6ZV56 151 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 DAZAP1Q96EP5 407 aaKnown RBP9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 CCL13Q99616 98 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 PLSCR4Q9NRQ2 329 aa9.18□□□□□ -0.94
SMARCA1-201ENST00000371121 ICE1Q9Y2F5 2266 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 HBDP02042 147 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 TNFRSF1AP19438 455 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 ERHP84090 104 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 CEND1Q8N111 149 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 CTSZQ9UBR2 303 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 ABCA1O95477 2261 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 CCL3L1P16619 93 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 CNTFRP26992 372 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 TCTEX1D4Q5JR98 221 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 ATP1A1-AS1Q5TC04 95 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 C9orf106Q8NAJ2 232 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 NHP2Q9NX24 153 aaKnown RBP9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 MSRB1Q9NZV6 116 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 TNFRSF13BO14836 293 aaPredicted RBP9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 CKS1BP61024 79 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 TMEM75Q8N9X5 138 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 STXBP6Q8NFX7 210 aa9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 SLC25A39Q9BZJ4 359 aaPredicted RBP9.17□□□□□ -0.94
SMARCA1-201ENST00000371121 URB1O60287 2271 aaKnown RBP9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 F8W1H4 67 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 MAFAQ8NHW3 353 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 TRGV5A0A0B4J1U4 118 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 NPIPB5A8MRT5 1133 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 M0R3E3 92 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 TRBV19A0A075B6N1 114 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 A0A1B0GV72 72 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 ZNF80P51504 273 aaPredicted RBP9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 TPPP3Q9BW30 176 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 TMEM133Q9H2Q1 129 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 TMEM14CQ9P0S9 112 aa9.16□□□□□ -0.94
SMARCA1-201ENST00000371121 SPRY3O43610 288 aa9.15□□□□□ -0.94
SMARCA1-201ENST00000371121 PPIFP30405 207 aaKnown RBP9.15□□□□□ -0.94
SMARCA1-201ENST00000371121 CXCL12P48061 93 aa9.15□□□□□ -0.94
SMARCA1-201ENST00000371121 MORN3Q6PF18 240 aaPredicted RBP9.15□□□□□ -0.94
SMARCA1-201ENST00000371121 DEFB108BQ8NET1 73 aa9.15□□□□□ -0.94
SMARCA1-201ENST00000371121 CT45A10P0DMU9 189 aa9.15□□□□□ -0.95
SMARCA1-201ENST00000371121 RIGQ13278 110 aa9.15□□□□□ -0.95
SMARCA1-201ENST00000371121 FER1L6-AS2Q96M78 137 aa9.15□□□□□ -0.95
SMARCA1-201ENST00000371121 DHRS13Q6UX07 377 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 GTSCR1Q86UQ5 136 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 PLCE1Q9P212 2302 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 IGLV2-18A0A075B6J9 118 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 TEX22C9J3V5 150 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 SLC25A17O43808 307 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 THBDP07204 575 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 CRYGBP07316 175 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 IGFBP4P22692 258 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 PSG8Q9UQ74 426 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 TECTAO75443 2155 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 TMSB15BA0A087X1C1 80 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 TSPAN13O95857 204 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 IGKV1-17P01599 117 aa9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 GATA1P15976 413 aaPredicted RBP9.14□□□□□ -0.95
SMARCA1-201ENST00000371121 GATA4P43694 442 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms