RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 M0R381 172 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 RPL23P62829 140 aaKnown RBP7.11□□□□□ -1.27
SYNE1-206ENST00000367253 C1orf100Q5SVJ3 147 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 DRAM1Q8N682 238 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 AQP3Q92482 292 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 RCHY1Q96PM5 261 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 FAM208BQ5VWN6 2430 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 IGHV1-69DA0A0B4J2H0 117 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 FAM223BA6NKX1 122 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 FOXI3A8MTJ6 420 aaPredicted RBP7.11□□□□□ -1.27
SYNE1-206ENST00000367253 IGHV1-69P01742 117 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 GUSBP1Q15486 140 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 CDPF1Q6NVV7 123 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 FAM223AQ8IWN6 122 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 UBE2WQ96B02 151 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 SMPXQ9UHP9 88 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 HIVEP2P31629 2446 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 TRBV5-5A0A0J9YX44 114 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 ZNF561-AS1K7EIQ3 104 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 ZIC3O60481 467 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 IGKCP01834 107 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 CHCHD1Q96BP2 118 aaKnown RBP7.11□□□□□ -1.27
SYNE1-206ENST00000367253 DNAJC30Q96LL9 226 aa7.11□□□□□ -1.27
SYNE1-206ENST00000367253 PNRC2Q9NPJ4 139 aaKnown RBP7.11□□□□□ -1.27
SYNE1-206ENST00000367253 IGLV3-12A0A075B6K2 115 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 A0A1B0GX51 115 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 TMEM89A2RUT3 159 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 HERVK_113P63121 156 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 BRD3OSQ6XYD6 125 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 PATJQ8NI35 1801 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 TRBV5-3A0A0A0MS03 114 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 A0A1W2PPM0 123 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 HIGD1CA8MV81 97 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 SAA1P0DJI8 122 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-206ENST00000367253 SRSF3P84103 164 aaKnown RBP7.1□□□□□ -1.27
SYNE1-206ENST00000367253 C8orf82Q6P1X6 216 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-206ENST00000367253 CSDC2Q9Y534 153 aaKnown RBP7.1□□□□□ -1.27
SYNE1-206ENST00000367253 TIAF1O95411 115 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 CCL3L1P16619 93 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 MPZP25189 248 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 C14orf177Q52M58 125 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 TSKUQ8WUA8 353 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 MED13Q9UHV7 2174 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 DOCK6Q96HP0 2047 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 SCO2A0A1W2PP80 73 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 C15orf61A6NNL5 157 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 C3orf79P0CE67 100 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 IFI27P40305 119 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-206ENST00000367253 ICAM4Q14773 271 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 IFI27L1Q96BM0 104 aa7.1□□□□□ -1.27
SYNE1-206ENST00000367253 ADARB2-AS1A8MUL3 147 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 TOMM40O96008 361 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 SHISA3A0PJX4 238 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 IGHG4P01861 327 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 PRSS57Q6UWY2 283 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 FMC1Q96HJ9 113 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 NPCDR1Q9BY65 106 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 PI4KAP42356 2102 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 ATOX1O00244 68 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 IGHG3P01860 377 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 NDUFV3P56181 108 aaKnown RBP7.09□□□□□ -1.27
SYNE1-206ENST00000367253 ZNF818PQ6ZRF7 136 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 TMEM190Q8WZ59 177 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 NPIPB3Q92617 1050 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 RNF126Q9BV68 326 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 MIA3Q5JRA6 1907 aa7.09□□□□□ -1.27
SYNE1-206ENST00000367253 TRBV24-1A0A075B6N3 115 aa7.09□□□□□ -1.28
SYNE1-206ENST00000367253 MSGN1A6NI15 193 aa7.09□□□□□ -1.28
SYNE1-206ENST00000367253 LINC01549A6NIU2 74 aa7.09□□□□□ -1.28
SYNE1-206ENST00000367253 CGAP01215 116 aa7.09□□□□□ -1.28
SYNE1-206ENST00000367253 ORMDL2Q53FV1 153 aa7.09□□□□□ -1.28
SYNE1-206ENST00000367253 GNB1LQ9BYB4 327 aa7.09□□□□□ -1.28
SYNE1-206ENST00000367253 TANC1Q9C0D5 1861 aa7.09□□□□□ -1.28
SYNE1-206ENST00000367253 NUP214P35658 2090 aaPredicted RBP7.08□□□□□ -1.28
SYNE1-206ENST00000367253 DOCK4Q8N1I0 1966 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 PEAR1Q5VY43 1037 aaPredicted RBP7.08□□□□□ -1.28
SYNE1-206ENST00000367253 FAM216BQ8N7L0 139 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 C8orf31Q8N9H6 132 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 ZNF625Q96I27 306 aaPredicted RBP7.08□□□□□ -1.28
SYNE1-206ENST00000367253 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 MYO7BQ6PIF6 2116 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 LYRM9A8MSI8 78 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 UBE2BP63146 152 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 MAPK1IP1LQ8NDC0 245 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 C10orf105Q8TEF2 133 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 PIEZO1Q92508 2521 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 TRAV8-3A0A0A6YYJ7 113 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 TRBV7-1A0A0A6YYK4 115 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 DEFB130BP0DP73 79 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 DEFB130AP0DP74 79 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 MYCNOSP40205 109 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 ATP5G3P48201 142 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 DAZAP2Q15038 168 aaPredicted RBP7.08□□□□□ -1.28
SYNE1-206ENST00000367253 SLC25A47Q6Q0C1 308 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 OVOL2Q9BRP0 275 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 OSTCQ9NRP0 149 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 PIKFYVEQ9Y2I7 2098 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 A0A1W2PPV9 198 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 PRR32B1ATL7 298 aa7.08□□□□□ -1.28
SYNE1-206ENST00000367253 NDUFC2-KCTD14E9PQ53 114 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms