RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 PRRC2AP48634 2157 aaKnown RBP3.35□□□□□ -1.87
SYNE2-204ENST00000358025 PRRC2CQ9Y520 2896 aaKnown RBP3.35□□□□□ -1.87
SYNE2-204ENST00000358025 A0A1W2PPI3 338 aa3.35□□□□□ -1.87
SYNE2-204ENST00000358025 TIMM23O14925 209 aa3.35□□□□□ -1.87
SYNE2-204ENST00000358025 ZNF138P52744 262 aa3.35□□□□□ -1.87
SYNE2-204ENST00000358025 F8VRH5 84 aa3.35□□□□□ -1.87
SYNE2-204ENST00000358025 IGHV3-7P01780 117 aa3.35□□□□□ -1.87
SYNE2-204ENST00000358025 FXYD3Q14802 87 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 C1orf122Q6ZSJ8 110 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 IGKV3-15P01624 115 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 UTF1Q5T230 341 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 SH2D7A6NKC9 451 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-204ENST00000358025 SAA1P0DJI8 122 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-204ENST00000358025 MED14OSP0DP75 135 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 PRB4P10163 310 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-204ENST00000358025 FXYD5Q96DB9 178 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 CDKN1AP38936 164 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 B9A039 149 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 COX8CQ7Z4L0 72 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 TEN1Q86WV5 123 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 RNF183Q96D59 192 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 MBD6Q96DN6 1003 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 RPP25Q9BUL9 199 aaKnown RBP3.34□□□□□ -1.87
SYNE2-204ENST00000358025 VSIRQ9H7M9 311 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 COL4A6Q14031 1691 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 H3BVH4 76 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 LGALS1P09382 135 aaKnown RBP3.34□□□□□ -1.87
SYNE2-204ENST00000358025 A6NNC1 897 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 U3KQK5 164 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 TRAV12-1A0A0B4J245 112 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 NDUFS7O75251 213 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 TDHQ8IZJ6 230 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 SIGLEC9Q9Y336 463 aa3.34□□□□□ -1.87
SYNE2-204ENST00000358025 TRAV8-2A0A0B4J237 113 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 LHBP01229 141 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 ZNF833PQ6ZTB9 187 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 TNFRSF18Q9Y5U5 241 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 PMS2P5A8MQ11 134 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 MAJINQ3KP22 176 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 TMEM74BQ9NUR3 256 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 ANKHD1Q8IWZ3 2542 aaKnown RBP3.34□□□□□ -1.88
SYNE2-204ENST00000358025 FOXH1O75593 365 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 HTN1P15515 57 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 VKORC1L1Q8N0U8 176 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 FOXC2Q99958 501 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 SPANXB1Q9NS25 103 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-204ENST00000358025 CMC4P56277 68 aaPredicted RBP3.34□□□□□ -1.88
SYNE2-204ENST00000358025 ETDBQ3ZM63 59 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 DGAT2L7PQ6IED9 249 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 A0A087WV48 116 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 A0A0G2JRQ6 117 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 E9PLD3 99 aa3.34□□□□□ -1.88
SYNE2-204ENST00000358025 TRAV8-4A0A0B4J246 113 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 ZXDAP98168 799 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 UFC1Q9Y3C8 167 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 CCL2P13500 99 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 SPINK9Q5DT21 86 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 SPINK14Q6IE38 97 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 FAM53AQ6NSI3 398 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-204ENST00000358025 CFAP161Q6P656 301 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 MYOD1P15172 320 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 NHP2Q9NX24 153 aaKnown RBP3.33□□□□□ -1.88
SYNE2-204ENST00000358025 TRBV19A0A075B6N1 114 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 MEOX1P50221 254 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 MOB4Q9Y3A3 225 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 FZR1Q9UM11 496 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 SRCAPQ6ZRS2 3230 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV3-21A0A0B4J1V1 117 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 M0R1W7 72 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 MAGEA5P43359 124 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 RPL32P62910 135 aaKnown RBP3.33□□□□□ -1.88
SYNE2-204ENST00000358025 FAM167A-AS1Q96KT0 104 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 TP73-AS1Q9UF72 201 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 IGKV1-39P01597 117 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 IGKV1D-39P04432 117 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 INAFM2P0DMQ5 153 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 RNF125Q96EQ8 232 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 CNFNQ9BYD5 112 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 C2orf70A6NJV1 201 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 M0R381 172 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 PRR30Q53SZ7 412 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-204ENST00000358025 FAM57AQ8TBR7 257 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 IGKV1D-33P01593 117 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 IGKV1-33P01594 117 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV1-2P23083 117 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 VWCEQ96DN2 955 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 EIF4EBP1Q13541 118 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-204ENST00000358025 UFSP1Q6NVU6 142 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 F11RQ9Y624 299 aaKnown RBP3.33□□□□□ -1.88
SYNE2-204ENST00000358025 NPIPB5A8MRT5 1133 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 RHOHQ15669 191 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 SUMO2P61956 95 aaKnown RBP3.33□□□□□ -1.88
SYNE2-204ENST00000358025 HS3ST6Q96QI5 342 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 LYZL6O75951 148 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 ADIPOQQ15848 244 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 UBTD1Q9HAC8 227 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 BPTFQ12830 3046 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 FAM223BA6NKX1 122 aa3.33□□□□□ -1.88
SYNE2-204ENST00000358025 SRD5A1P18405 259 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms