RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 VMA21Q3ZAQ7 101 aa9.57□□□□□ -0.88
SMARCAL1-201ENST00000357276 LYPD1Q8N2G4 141 aa9.57□□□□□ -0.88
SMARCAL1-201ENST00000357276 HHLA3Q9XRX5 114 aa9.57□□□□□ -0.88
SMARCAL1-201ENST00000357276 INTS1Q8N201 2190 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 CCL3L1P16619 93 aa9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 TNFAIP6P98066 277 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 COX8CQ7Z4L0 72 aa9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 VGLL1Q99990 258 aa9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 MRPS12O15235 138 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 AZU1P20160 251 aa9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 FCGR2BP31994 310 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 FXYD2P54710 66 aa9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 MRPL51Q4U2R6 128 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 GPR179Q6PRD1 2367 aa9.56□□□□□ -0.88
SMARCAL1-201ENST00000357276 LOC389332A0A1B0GUA5 103 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 SPAARA0A1B0GVQ0 90 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 ATP1A1-AS1Q5TC04 95 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 TMEM200BQ69YZ2 307 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 AMN1Q8IY45 258 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 PSMG3-AS1Q96PY0 264 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 PROCRQ9UNN8 238 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 K7EM74 188 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 DKK2Q9UBU2 259 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 TTC28Q96AY4 2481 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 TMEM213A2RRL7 107 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 MC5RP33032 325 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 LYZL1Q6UWQ5 148 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 SPATA25Q9BR10 227 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 NGBQ9NPG2 151 aa9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 F11RQ9Y624 299 aaKnown RBP9.55□□□□□ -0.88
SMARCAL1-201ENST00000357276 IGKV2D-26A0A0A0MRZ7 120 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 M0R1B8 84 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 PLXNB1O43157 2135 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 GNG7O60262 68 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 HLA-DRB4P13762 266 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 NMUP48645 174 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 SEM1Q6ZVN7 128 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 C17orf77Q96MU5 243 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 SIGMAR1Q99720 223 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 SHANK2-AS3Q9BTD1 123 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 HLA-DRB4X5D2U9 266 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 TEX22C9J3V5 150 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 E9PLD3 99 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 CD300EQ496F6 205 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 BCL6BQ8N143 479 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 MUC3AQ02505 3323 aa9.54□□□□□ -0.88
SMARCAL1-201ENST00000357276 H3BRN7 92 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 I3L2K1 104 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 DLX6P56179 175 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 LYZP61626 148 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 ODF1Q14990 250 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 ZNF562Q6V9R5 426 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 ZNF575Q86XF7 245 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 NPYP01303 97 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 RPL27AP46776 148 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 FXYD7P58549 80 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 SRSF1Q07955 248 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 ASCL2Q99929 193 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 CACNA1HO95180 2353 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 F8W1H4 67 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 K7EQM0 130 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 TNFRSF13BO14836 293 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 GOSR1O95249 250 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 IGKV1-17P01599 117 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 TCTAP57738 103 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 C8orf49Q96NF6 230 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 SCNM1Q9BWG6 230 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 TMEM133Q9H2Q1 129 aa9.53□□□□□ -0.88
SMARCAL1-201ENST00000357276 IGHV3-21A0A0B4J1V1 117 aa9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 EVI2AP22794 236 aa9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 CHAC1Q9BUX1 264 aa9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 MBD3L4A6NDZ8 208 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 MBD3L3A6NE82 208 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 MBD3L5A6NJ08 208 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 MBD3L2Q8NHZ7 208 aaPredicted RBP9.52□□□□□ -0.89
SMARCAL1-201ENST00000357276 SERTM2A0A1B0GWG4 89 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 FBLL1A6NHQ2 334 aaKnown RBP9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 CEACAM4O75871 244 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 WT1P19544 449 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 ZNF474Q6S9Z5 364 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 GTSF1LQ9H1H1 148 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 BMI1P35226 326 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 IGFL2Q6UWQ7 119 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 SIGLEC9Q9Y336 463 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 CADP27708 2225 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 TRBV25-1A0A075B6N4 114 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 GCSHP23434 173 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 TM4SF20Q53R12 229 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 CEND1Q8N111 149 aa9.51□□□□□ -0.89
SMARCAL1-201ENST00000357276 A0A1W2PRD5 423 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 A0A1W2PRF3 423 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 A0A1W2PRM7 423 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 K7ERJ3 54 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 IGLC6P0CF74 106 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 RNF185Q96GF1 192 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 TPPP3Q9BW30 176 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms