RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 IGHV3-64A0A075B6Q5 118 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 CD300EQ496F6 205 aaPredicted RBP11.44□□□□□ -0.58
SREBF1-202ENST00000355815 TEX43Q6ZNM6 134 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 KIR2DL5BA0A0G2JN68 375 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 KIR2DL5BA0A0G2JPC4 375 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.44□□□□□ -0.58
SREBF1-202ENST00000355815 AREGP15514 252 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 MC5RP33032 325 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 C11orf53Q8IXP5 236 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 KIR2DL5AQ8N109 375 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 C9JCJ5 164 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 GFRA3O60609 400 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 IGHG3P01860 377 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 LYPD2Q6UXB3 125 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 MS4A6AQ9H2W1 248 aa11.44□□□□□ -0.58
SREBF1-202ENST00000355815 A0A0U1RRA0 63 aa11.43□□□□□ -0.58
SREBF1-202ENST00000355815 FRMD6-AS1P0C7T7 363 aa11.43□□□□□ -0.58
SREBF1-202ENST00000355815 ANXA2RQ3ZCQ2 193 aa11.43□□□□□ -0.58
SREBF1-202ENST00000355815 FAM57AQ8TBR7 257 aa11.43□□□□□ -0.58
SREBF1-202ENST00000355815 COL8A2P25067 703 aa11.43□□□□□ -0.58
SREBF1-202ENST00000355815 IGFBPL1Q8WX77 278 aa11.43□□□□□ -0.58
SREBF1-202ENST00000355815 SPRY4Q9C004 299 aa11.43□□□□□ -0.58
SREBF1-202ENST00000355815 CHCHD1Q96BP2 118 aaKnown RBP11.43□□□□□ -0.58
SREBF1-202ENST00000355815 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-202ENST00000355815 IFI27P40305 119 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-202ENST00000355815 UTF1Q5T230 341 aa11.43□□□□□ -0.58
SREBF1-202ENST00000355815 IGHV3OR16-10A0A075B7F0 116 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 HOXA3O43365 443 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-202ENST00000355815 MEF2CQ06413 473 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-202ENST00000355815 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 GAGE2EQ4V326 116 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 FAM71F2Q6NXP2 309 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 GAGE2DQ9UEU5 116 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 PSG8Q9UQ74 426 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 ATP5LO75964 103 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 DPM2O94777 84 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 AMN1Q8IY45 258 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 CHTOPQ9Y3Y2 248 aaKnown RBP11.42□□□□□ -0.58
SREBF1-202ENST00000355815 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-202ENST00000355815 PMS2P5A8MQ11 134 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 UPK2O00526 184 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 Q6ZSR3 168 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 RAB1CQ92928 201 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 FMC1Q96HJ9 113 aa11.42□□□□□ -0.58
SREBF1-202ENST00000355815 PSMB11A5LHX3 300 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 ZNF815PA8K554 130 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 AZU1P20160 251 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 YPEL3P61236 119 aaPredicted RBP11.41□□□□□ -0.58
SREBF1-202ENST00000355815 MSMPQ1L6U9 139 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 A0A0G2JNJ9 132 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 ARHGAP32A7KAX9 2087 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 MFAP4P55083 255 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 IGFL4Q6B9Z1 124 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 Q9UFV3 132 aa11.41□□□□□ -0.58
SREBF1-202ENST00000355815 IGKV3OR2-268A0A0C4DH90 116 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 IGKCP01834 107 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 TCRAP04437 139 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 MRPL52Q86TS9 123 aaKnown RBP11.4□□□□□ -0.58
SREBF1-202ENST00000355815 CACNG8Q8WXS5 425 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 GEMIN7Q9H840 131 aaKnown RBP11.4□□□□□ -0.58
SREBF1-202ENST00000355815 MRPL27Q9P0M9 148 aaKnown RBP11.4□□□□□ -0.58
SREBF1-202ENST00000355815 RPUSD1Q9UJJ7 312 aaKnown RBP11.4□□□□□ -0.58
SREBF1-202ENST00000355815 IGKV3D-20A0A0C4DH25 116 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 K7ERJ3 54 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 KRTAP27-1Q3LI81 207 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 SPACA3Q8IXA5 215 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 RAB1BQ9H0U4 201 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 ARMS2P0C7Q2 107 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 OR9G4Q8NGQ1 327 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 Q8TAT8 98 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 ZFYVE26Q68DK2 2539 aa11.4□□□□□ -0.58
SREBF1-202ENST00000355815 A8MWV9 139 aa11.4□□□□□ -0.59
SREBF1-202ENST00000355815 KLF17Q5JT82 389 aaPredicted RBP11.4□□□□□ -0.59
SREBF1-202ENST00000355815 TMEM200BQ69YZ2 307 aa11.4□□□□□ -0.59
SREBF1-202ENST00000355815 OSR1Q8TAX0 266 aaPredicted RBP11.4□□□□□ -0.59
SREBF1-202ENST00000355815 RAB9AP51151 201 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 LYZL1Q6UWQ5 148 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 FAM168AQ92567 244 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 FAM215AQ9Y5M1 114 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 SONP18583 2426 aaKnown RBP11.39□□□□□ -0.59
SREBF1-202ENST00000355815 TRAV2A0A0B4J234 112 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 K7EMI3 77 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 LMO1P25800 156 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 BVES-AS1Q5T3Y7 98 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 CSTL1Q9H114 145 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 RPS20P60866 119 aaKnown RBP11.39□□□□□ -0.59
SREBF1-202ENST00000355815 GLMPQ8WWB7 406 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 RNASE6Q93091 150 aaKnown RBP11.39□□□□□ -0.59
SREBF1-202ENST00000355815 DKK4Q9UBT3 224 aa11.39□□□□□ -0.59
SREBF1-202ENST00000355815 IGHV2-26A0A0B4J1V2 119 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 TCRBV4S1A1TA0A5B7 111 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 F2RL2O00254 374 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 CFHR2P36980 270 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 ODF3L1Q8IXM7 274 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
SREBF1-202ENST00000355815 V9GYV3 84 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms