RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 FUSP35637 526 aaKnown RBP eCLIP6.62□□□□□ -1.35
HTT-201ENST00000355072 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 CYTL1Q9NRR1 136 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 NPIPB5A8MRT5 1133 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 TRIP6Q15654 476 aaKnown RBP6.62□□□□□ -1.35
HTT-201ENST00000355072 C9orf50Q5SZB4 431 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 MBNL3Q9NUK0 354 aaKnown RBP6.62□□□□□ -1.35
HTT-201ENST00000355072 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.62□□□□□ -1.35
HTT-201ENST00000355072 Q6ZS92 163 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 LIME1Q9H400 295 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 IGKV3D-15A0A087WSY6 115 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 ZNF501Q96CX3 271 aaPredicted RBP6.62□□□□□ -1.35
HTT-201ENST00000355072 TRAV12-3A0A0B4J271 114 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 C9orf172C9J069 976 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 UQCRQO14949 82 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 A0A087X0K7 114 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 RHOHQ15669 191 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 CARD19Q96LW7 228 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 SMIM2Q9BVW6 85 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 DEFB109BQ30KR1 87 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 ETDBQ3ZM63 59 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 NABP1Q96AH0 204 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 A0A0J9YW62 118 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 SRRM5B3KS81 715 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 CPAMD8Q8IZJ3 1885 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 NOTCH2Q04721 2471 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 SNRPCP09234 159 aaKnown RBP6.61□□□□□ -1.35
HTT-201ENST00000355072 CXCL5P42830 114 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 Q86TA4 180 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 IGKV3D-11A0A0A0MRZ8 115 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 TMEM219Q86XT9 240 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 ORMDL1Q9P0S3 153 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 TAX1BP3O14907 124 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 TNRC6BQ9UPQ9 1833 aaKnown RBP6.61□□□□□ -1.35
HTT-201ENST00000355072 A0A087WX48 190 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 CRYGSP22914 178 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 PRTN3P24158 256 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 IGHV1OR15-9A0A0B4J2B8 117 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 CELA2BP08218 269 aaPredicted RBP6.61□□□□□ -1.35
HTT-201ENST00000355072 SPATA12Q7Z6I5 190 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 C8orf31Q8N9H6 132 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 IGLV3-12A0A075B6K2 115 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 IGHG2P01859 326 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 PEBP1P30086 187 aaKnown RBP6.61□□□□□ -1.35
HTT-201ENST00000355072 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
HTT-201ENST00000355072 TECTAO75443 2155 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 PMS2CLQ68D20 193 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 HILPDAQ9Y5L2 63 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 DSCAMO60469 2012 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 CCL13Q99616 98 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 GATA4P43694 442 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 PAX8Q06710 450 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 GFI1BQ5VTD9 330 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 IGHV3-64DA0A0J9YX35 117 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 DCTN5Q9BTE1 182 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 MIR17HGQ75NE6 70 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 PRIMA1Q86XR5 153 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 LINC01620Q4KN68 170 aa6.6□□□□□ -1.35
HTT-201ENST00000355072 CCL8P80075 99 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 PDCD1Q15116 288 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 TRAV8-3A0A0A6YYJ7 113 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 LTAP01374 205 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 FAM60AQ9NP50 221 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 ANAPC10Q9UM13 185 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 COX6A1P12074 109 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 PSG8Q9UQ74 426 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 PAX4O43316 350 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 IGLV3-19P01714 112 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 CRYBA4P53673 196 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 FGF6P10767 208 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 MDKP21741 143 aaPredicted RBP6.59□□□□□ -1.35
HTT-201ENST00000355072 RNASE4P34096 147 aaKnown RBP6.59□□□□□ -1.35
HTT-201ENST00000355072 MRPL55Q7Z7F7 128 aaKnown RBP6.59□□□□□ -1.35
HTT-201ENST00000355072 SLX1AQ9BQ83 275 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 FOXQ1Q9C009 403 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 TRAV12-1A0A0B4J245 112 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 SHISA7A6NL88 538 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 NCR2O95944 276 aa6.59□□□□□ -1.35
HTT-201ENST00000355072 PRSS12P56730 875 aa6.59□□□□□ -1.36
HTT-201ENST00000355072 C11orf44Q8N8P7 122 aa6.59□□□□□ -1.36
HTT-201ENST00000355072 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.36
HTT-201ENST00000355072 ZCCHC24Q8N2G6 241 aaKnown RBP6.58□□□□□ -1.36
HTT-201ENST00000355072 C10orf105Q8TEF2 133 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 ACANP16112 2415 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 STHQ8IWL8 128 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 C17orf98A8MV24 154 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 SHISA8B8ZZ34 492 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 RPL39P5Q59GN2 51 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 FBXL7Q9UJT9 491 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 NTN3O00634 580 aaPredicted RBP6.58□□□□□ -1.36
HTT-201ENST00000355072 PAX9P55771 341 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 ZNF826PQ6ZT77 177 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 MRPL53Q96EL3 112 aaKnown RBP6.58□□□□□ -1.36
HTT-201ENST00000355072 PLPPR2Q96GM1 343 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 MP68P56378 58 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 FAM240AA0A1B0GVK7 77 aa6.58□□□□□ -1.36
HTT-201ENST00000355072 ZNF474Q6S9Z5 364 aaPredicted RBP6.58□□□□□ -1.36
HTT-201ENST00000355072 HIVEP2P31629 2446 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms