RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 GNLYP22749 145 aa8.36□□□□□ -1.07
TRAF3IP2-201ENST00000340026 CD24P25063 80 aa8.36□□□□□ -1.07
TRAF3IP2-201ENST00000340026 KLF17Q5JT82 389 aaPredicted RBP8.36□□□□□ -1.07
TRAF3IP2-201ENST00000340026 NIT1Q86X76 327 aa8.36□□□□□ -1.07
TRAF3IP2-201ENST00000340026 CHCHD1Q96BP2 118 aaKnown RBP8.36□□□□□ -1.07
TRAF3IP2-201ENST00000340026 RCHY1Q96PM5 261 aa8.36□□□□□ -1.07
TRAF3IP2-201ENST00000340026 NRN1Q9NPD7 142 aa8.36□□□□□ -1.07
TRAF3IP2-201ENST00000340026 FBXL7Q9UJT9 491 aa8.36□□□□□ -1.07
TRAF3IP2-201ENST00000340026 DCHS2Q6V1P9 2916 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 SAPCD1Q5SSQ6 148 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 ZC2HC1AQ96GY0 325 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 PRO1933Q9H354 126 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 ZFAND3Q9H8U3 227 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 TRBV7-1A0A0A6YYK4 115 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 RBAKDNA6NC62 111 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 SH2D7A6NKC9 451 aaPredicted RBP8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 IGHV4-39P01824 125 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 CSN1S1P47710 185 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 ZNF493Q6ZR52 646 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 PRNTQ86SH4 94 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 C5orf56Q8N8D9 126 aa8.35□□□□□ -1.07
TRAF3IP2-201ENST00000340026 PMCHP20382 165 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 AMTP48728 403 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 KIAA1644Q3SXP7 199 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 TCF24Q7RTU0 167 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 MRPL53Q96EL3 112 aaKnown RBP8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 C17orf77Q96MU5 243 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 ATRXP46100 2492 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 UQCRFS1P47985 274 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 PIP4P2Q8N4L2 257 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 RPH3ALQ9UNE2 315 aa8.34□□□□□ -1.07
TRAF3IP2-201ENST00000340026 TRAV8-1A0A0A6YYK1 113 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 H3BUA1 57 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CRXO43186 299 aaPredicted RBP8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 RIGQ13278 110 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 FAM120AOSQ5T036 256 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 PIMREGQ9BSJ6 248 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CLEC5AQ9NY25 188 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ZNF580Q9UK33 172 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 A0A1B0GUT8 65 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 FAM223BA6NKX1 122 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 H3BTX0 84 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ATP6V0E1O15342 81 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CTRLP40313 264 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CRIP1P50238 77 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 RPS20P60866 119 aaKnown RBP8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 FAM223AQ8IWN6 122 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 C10orf105Q8TEF2 133 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 PPP1R14DQ9NXH3 145 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 MOB4Q9Y3A3 225 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 U3KQE9 123 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 RELNP78509 3460 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 LRBAP50851 2863 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 BUB3O43684 328 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 SNRPCP09234 159 aaKnown RBP8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 UNQ5815/PRO19632Q6UWF5 114 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 EEF1AKMT3Q96AZ1 226 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 SGK494Q96LW2 274 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 SLC50A1Q9BRV3 221 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ZMAT5Q9UDW3 170 aaKnown RBP8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 SMAD5-AS1Q9Y6J3 95 aa8.33□□□□□ -1.08
TRAF3IP2-201ENST00000340026 IGHV1-69DA0A0B4J2H0 117 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 C20orf202A1L168 122 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 A6NJY4 79 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 IGHV1-69P01742 117 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 C15orf32Q32M92 178 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 HIF1ANQ9NWT6 349 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 SPTBN4Q9H254 2564 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 OR2T8A6NH00 312 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ZNF705FA8MVS1 300 aaPredicted RBP8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 IGHG4P01861 327 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 IGF1P05019 195 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 OR5AL1P0C617 328 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ZNF705DP0CH99 300 aaPredicted RBP8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ZNF705BP0CI00 300 aaPredicted RBP8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CT45A10P0DMU9 189 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 URB1-AS1Q96HZ7 61 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 PGLYRP4Q96LB8 373 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 MIEN1Q9BRT3 115 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 ITPR1Q14643 2758 aa8.32□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CACNA1AO00555 2505 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 HSBP1O75506 76 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CAMPP49913 170 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 RHOGP84095 191 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 RELQ04864 619 aaPredicted RBP8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 BCL6BQ8N143 479 aaPredicted RBP8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 PIFOQ8TCI5 191 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CCDC140Q96MF4 163 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 PSMG3-AS1Q96PY0 264 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 PRR25Q96S07 402 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 VAMP8Q9BV40 100 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CNFNQ9BYD5 112 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 CLPSL1A2RUU4 121 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 M0QZK8 103 aa8.31□□□□□ -1.08
TRAF3IP2-201ENST00000340026 C3orf79P0CE67 100 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms