RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 WDR86Q86TI4 376 aa11.14□□□□□ -0.63
RTN4-202ENST00000337526 POLR3KQ9Y2Y1 108 aaPredicted RBP11.14□□□□□ -0.63
RTN4-202ENST00000337526 MED13Q9UHV7 2174 aa11.14□□□□□ -0.63
RTN4-202ENST00000337526 ZNF503-AS2A6NEH8 195 aa11.14□□□□□ -0.63
RTN4-202ENST00000337526 LY6HO94772 140 aa11.14□□□□□ -0.63
RTN4-202ENST00000337526 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
RTN4-202ENST00000337526 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
RTN4-202ENST00000337526 EFNA4P52798 201 aa11.14□□□□□ -0.63
RTN4-202ENST00000337526 RIPPLY3P57055 190 aa11.14□□□□□ -0.63
RTN4-202ENST00000337526 ANAPC1Q9H1A4 1944 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 TMEM8BA6NDV4 472 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 NDPQ00604 133 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 GAGE13Q4V321 117 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 Q86TA4 180 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 C18orf32Q8TCD1 76 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 C20orf144Q9BQM9 153 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 SRRM4A7MD48 611 aaKnown RBP11.13□□□□□ -0.63
RTN4-202ENST00000337526 IGLV3-1P01715 115 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 TDGF1P3P51864 188 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 C9orf139Q6ZV77 190 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 CD28P10747 220 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 COL8A2P25067 703 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 UBE2V1Q13404 147 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 LY6G6EA0A0G2JKS1 128 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 LURAP1LQ8IV03 231 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 U3KQA8 63 aa11.13□□□□□ -0.63
RTN4-202ENST00000337526 NOTCH2Q04721 2471 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 A0A1W2PRX2 142 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 LY6DQ14210 128 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 IGHV2-70P01814 119 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 MRPL52Q86TS9 123 aaKnown RBP11.12□□□□□ -0.63
RTN4-202ENST00000337526 HAPLN4Q86UW8 402 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 NDUFA4L2Q9NRX3 87 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 M0R1W7 72 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 SIGMAR1Q99720 223 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 IGHV3-64A0A075B6Q5 118 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 IGHV4-39P01824 125 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 TMEM158Q8WZ71 300 aa11.12□□□□□ -0.63
RTN4-202ENST00000337526 A0A0U1RRA0 63 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 ZNF688P0C7X2 276 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 STHQ8IWL8 128 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 DEFB104AQ8WTQ1 72 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 TRGV11A0A075B6L2 103 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 A8MWV9 139 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 PAX2Q02962 417 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 LSM4Q9Y4Z0 139 aaKnown RBP11.11□□□□□ -0.63
RTN4-202ENST00000337526 GGTLC3B5MD39 225 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 YPEL3P61236 119 aaPredicted RBP11.11□□□□□ -0.63
RTN4-202ENST00000337526 C14orf178Q8N769 122 aaPredicted RBP11.11□□□□□ -0.63
RTN4-202ENST00000337526 ZNF114Q8NC26 417 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 SNHG12Q9BXW3 62 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 GFRA4Q9GZZ7 299 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 PDE6HQ13956 83 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 LINC00477Q96M19 166 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 DPH3P1Q9H4G8 78 aa11.11□□□□□ -0.63
RTN4-202ENST00000337526 PRTN3P24158 256 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 TMEM249Q2WGJ8 235 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 ZNF876PQ49A33 203 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 BRD3OSQ6XYD6 125 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 TRBV7-1A0A0A6YYK4 115 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 E7EQL1 145 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 H3BUX3 64 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 TDGF1P13385 188 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
RTN4-202ENST00000337526 FAM231BA6NCW3 169 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 GATA4P43694 442 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 TMEM155Q4W5P6 130 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 ZNF562Q6V9R5 426 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 SRSF8Q9BRL6 282 aaKnown RBP11.09□□□□□ -0.63
RTN4-202ENST00000337526 ERG28Q9UKR5 140 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 SRCAPQ6ZRS2 3230 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
RTN4-202ENST00000337526 CD5LO43866 347 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 STPG4Q8N801 248 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 NCOR1P1Q9H4R4 102 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 WNK1Q9H4A3 2382 aa11.09□□□□□ -0.63
RTN4-202ENST00000337526 KIR3DS1Q14943 382 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 C17orf58Q2M2W7 97 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 DUX4L9Q6RFH8 374 aaPredicted RBP11.08□□□□□ -0.64
RTN4-202ENST00000337526 V9GYV3 84 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 ZNF134P52741 427 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 YAE1D1Q9NRH1 226 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 ZNF492Q9P255 531 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 VCYO14598 125 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 FCN3O75636 299 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 LYPD6BQ8NI32 183 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 C15orf65H3BRN8 121 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 CT83Q5H943 113 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 C11orf44Q8N8P7 122 aa11.08□□□□□ -0.64
RTN4-202ENST00000337526 PLXNA2O75051 1894 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 CACNA1AO00555 2505 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 WT1-ASQ06250 92 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 Q6ZWC4 215 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 TMEM213A2RRL7 107 aa11.07□□□□□ -0.64
RTN4-202ENST00000337526 Q8NFD4 153 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms