RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 C11orf52Q96A22 123 aa12.69□□□□□ -0.38
HDAC5-202ENST00000336057 MRAP2Q96G30 205 aa12.69□□□□□ -0.38
HDAC5-202ENST00000336057 DOPEY2Q9Y3R5 2298 aa12.69□□□□□ -0.38
HDAC5-202ENST00000336057 COL4A4P53420 1690 aaPredicted RBP12.69□□□□□ -0.38
HDAC5-202ENST00000336057 PCNX2A6NKB5 2137 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 MMP23AO75900 390 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 CT83Q5H943 113 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 LDLRAD2Q5SZI1 272 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 IGFL4Q6B9Z1 124 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 MED13LQ71F56 2210 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
HDAC5-202ENST00000336057 FXYD7P58549 80 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 JMJD8Q96S16 334 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 CNTFRP26992 372 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 C9orf139Q6ZV77 190 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 LINC00311Q8N616 119 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 LINC01587Q99440 93 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 VCX2Q9H322 139 aa12.68□□□□□ -0.38
HDAC5-202ENST00000336057 TRBV7-1A0A0A6YYK4 115 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 IGKV3OR2-268A0A0C4DH90 116 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 LOXP28300 417 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-202ENST00000336057 IFI27P40305 119 aaPredicted RBP12.67□□□□□ -0.38
HDAC5-202ENST00000336057 C11orf53Q8IXP5 236 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 AMN1Q8IY45 258 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 OR5A1Q8NGJ0 315 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 ARMS2P0C7Q2 107 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 PRSS22Q9GZN4 317 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 ZNF562Q6V9R5 426 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 FAM231DQ6ZW35 169 aa12.67□□□□□ -0.38
HDAC5-202ENST00000336057 TMEM249Q2WGJ8 235 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 SRD5A1P18405 259 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 A0A087X0K7 114 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 PRR20EP86478 221 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 PRR20CP86479 221 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 PRR20DP86480 221 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 PRR20BP86481 221 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 PRR20AP86496 221 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 GTSCR1Q86UQ5 136 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 PEMTQ9UBM1 199 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 MALRD1Q5VYJ5 2156 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 H3BRM9 83 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 VWC2Q2TAL6 325 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 FAM215AQ9Y5M1 114 aa12.66□□□□□ -0.38
HDAC5-202ENST00000336057 NDPQ00604 133 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 Q6ZWC4 215 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 TMEM75Q8N9X5 138 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 SRRM4A7MD48 611 aaKnown RBP12.65□□□□□ -0.38
HDAC5-202ENST00000336057 ZNF815PA8K554 130 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 OBSL1O75147 1896 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 C2orf16Q68DN1 1984 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 EP400Q96L91 3159 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 TTC28Q96AY4 2481 aa12.65□□□□□ -0.38
HDAC5-202ENST00000336057 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■■□□□ 12.2
HDAC5-202ENST00000336057 MCRIP2Q9BUT9 160 aaKnown RBP12.65□□□□□ -0.39
HDAC5-202ENST00000336057 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.39
HDAC5-202ENST00000336057 MRPS16Q9Y3D3 137 aaKnown RBP12.65□□□□□ -0.39
HDAC5-202ENST00000336057 SMIM27A0A1W2PRY6 76 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 TMEM101Q96IK0 257 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 MEGF9Q9H1U4 602 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 KLF2Q9Y5W3 355 aaPredicted RBP12.64□□□□□ -0.39
HDAC5-202ENST00000336057 NCOA6Q14686 2063 aaPredicted RBP12.64□□□□□ -0.39
HDAC5-202ENST00000336057 LINC00477Q96M19 166 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 TRBV19A0A075B6N1 114 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 SLAQ13239 276 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 SMKR1H3BMG3 65 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 SAMD5Q5TGI4 173 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 WFDC12Q8WWY7 111 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 ZNF479Q96JC4 524 aa12.64□□□□□ -0.39
HDAC5-202ENST00000336057 HOXA3O43365 443 aaPredicted RBP12.63□□□□□ -0.39
HDAC5-202ENST00000336057 PRR30Q53SZ7 412 aaPredicted RBP12.63□□□□□ -0.39
HDAC5-202ENST00000336057 SFTA2Q6UW10 78 aa12.63□□□□□ -0.39
HDAC5-202ENST00000336057 BRD3OSQ6XYD6 125 aa12.63□□□□□ -0.39
HDAC5-202ENST00000336057 BCL6BQ8N143 479 aaPredicted RBP12.63□□□□□ -0.39
HDAC5-202ENST00000336057 TPSG1Q9NRR2 321 aa12.63□□□□□ -0.39
HDAC5-202ENST00000336057 LTBP2Q14767 1821 aa12.63□□□□□ -0.39
HDAC5-202ENST00000336057 TTC32Q5I0X7 151 aa12.63□□□□□ -0.39
HDAC5-202ENST00000336057 CD300EQ496F6 205 aaPredicted RBP12.63□□□□□ -0.39
HDAC5-202ENST00000336057 H3BUX3 64 aa12.62□□□□□ -0.39
HDAC5-202ENST00000336057 TRGV11A0A075B6L2 103 aa12.62□□□□□ -0.39
HDAC5-202ENST00000336057 SMAD7O15105 426 aaKnown RBP12.62□□□□□ -0.39
HDAC5-202ENST00000336057 SAA4P35542 130 aa12.62□□□□□ -0.39
HDAC5-202ENST00000336057 TMEM158Q8WZ71 300 aa12.62□□□□□ -0.39
HDAC5-202ENST00000336057 DPH3P1Q9H4G8 78 aa12.62□□□□□ -0.39
HDAC5-202ENST00000336057 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
HDAC5-202ENST00000336057 UBE2V1Q13404 147 aa12.62□□□□□ -0.39
HDAC5-202ENST00000336057 DIAPH2-AS1Q14236 149 aa12.62□□□□□ -0.39
HDAC5-202ENST00000336057 KIAA1549LQ6ZVL6 1849 aa12.61□□□□□ -0.39
HDAC5-202ENST00000336057 NAA38Q9BRA0 125 aaKnown RBP12.61□□□□□ -0.39
HDAC5-202ENST00000336057 ALPK3Q96L96 1907 aa12.61□□□□□ -0.39
HDAC5-202ENST00000336057 THAP8Q8NA92 274 aa12.61□□□□□ -0.39
HDAC5-202ENST00000336057 SELENOKQ9Y6D0 94 aa12.61□□□□□ -0.39
HDAC5-202ENST00000336057 NDUFB8O95169 186 aa12.61□□□□□ -0.39
HDAC5-202ENST00000336057 ERCC8Q13216 396 aa12.61□□□□□ -0.39
HDAC5-202ENST00000336057 FXYD5Q96DB9 178 aa12.61□□□□□ -0.39
HDAC5-202ENST00000336057 LSM4Q9Y4Z0 139 aaKnown RBP12.61□□□□□ -0.39
HDAC5-202ENST00000336057 TMEM213A2RRL7 107 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms