RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 RPUSD4Q96CM3 377 aaKnown RBP13.36□□□□□ -0.27
SSNA1-201ENST00000322310 SNURFLB1AK76 121 aa13.35□□□□□ -0.27
SSNA1-201ENST00000322310 NXPH4O95158 308 aa13.35□□□□□ -0.27
SSNA1-201ENST00000322310 RPL7P18124 248 aaKnown RBP13.35□□□□□ -0.27
SSNA1-201ENST00000322310 AKR1C1Q04828 323 aa13.35□□□□□ -0.27
SSNA1-201ENST00000322310 GFI1BQ5VTD9 330 aa13.35□□□□□ -0.27
SSNA1-201ENST00000322310 Q6ZTI0 123 aa13.35□□□□□ -0.27
SSNA1-201ENST00000322310 LRRC20Q8TCA0 184 aa13.35□□□□□ -0.27
SSNA1-201ENST00000322310 C15orf40Q8WUR7 153 aa13.35□□□□□ -0.27
SSNA1-201ENST00000322310 VCX3AQ9NNX9 186 aa13.35□□□□□ -0.27
SSNA1-201ENST00000322310 PITX3O75364 302 aa13.34□□□□□ -0.27
SSNA1-201ENST00000322310 AKAIN1P0CW23 69 aa13.34□□□□□ -0.27
SSNA1-201ENST00000322310 S100A7P31151 101 aa13.34□□□□□ -0.27
SSNA1-201ENST00000322310 SSBP1Q04837 148 aaKnown RBP13.34□□□□□ -0.27
SSNA1-201ENST00000322310 TMED4Q7Z7H5 227 aa13.34□□□□□ -0.27
SSNA1-201ENST00000322310 PRRT1Q99946 306 aa13.34□□□□□ -0.27
SSNA1-201ENST00000322310 C20orf144Q9BQM9 153 aa13.34□□□□□ -0.27
SSNA1-201ENST00000322310 HIGD1AQ9Y241 93 aa13.34□□□□□ -0.27
SSNA1-201ENST00000322310 A0A087X0K7 114 aa13.33□□□□□ -0.28
SSNA1-201ENST00000322310 GCSHP23434 173 aa13.33□□□□□ -0.28
SSNA1-201ENST00000322310 RAP2BP61225 183 aa13.33□□□□□ -0.28
SSNA1-201ENST00000322310 CLVS1Q8IUQ0 354 aaPredicted RBP13.33□□□□□ -0.28
SSNA1-201ENST00000322310 AP3S1Q92572 193 aa13.33□□□□□ -0.28
SSNA1-201ENST00000322310 J3KRW8 73 aa13.32□□□□□ -0.28
SSNA1-201ENST00000322310 MIXL1Q9H2W2 232 aa13.32□□□□□ -0.28
SSNA1-201ENST00000322310 A0A087WXM4 84 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 WRBO00258 174 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 IL5P05113 134 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 SNRPCP09234 159 aaKnown RBP13.31□□□□□ -0.28
SSNA1-201ENST00000322310 OR5G3P0C626 314 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 CYP2G1PQ6ZSU1 146 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 ACOT7LQ6ZUV0 252 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 CCDC190Q86UF4 302 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 NFE4Q86UQ8 179 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 SMIM4Q8WVI0 70 aa13.31□□□□□ -0.28
SSNA1-201ENST00000322310 UBR4Q5T4S7 5183 aa13.3□□□□□ -0.28
SSNA1-201ENST00000322310 TRGV2A0A075B6R0 118 aa13.3□□□□□ -0.28
SSNA1-201ENST00000322310 PRAC2D3DTV9 90 aa13.3□□□□□ -0.28
SSNA1-201ENST00000322310 H3BP45 60 aa13.3□□□□□ -0.28
SSNA1-201ENST00000322310 HYPMO75409 117 aa13.3□□□□□ -0.28
SSNA1-201ENST00000322310 SRPXP78539 464 aa13.3□□□□□ -0.28
SSNA1-201ENST00000322310 MRPS10P82664 201 aaKnown RBP13.3□□□□□ -0.28
SSNA1-201ENST00000322310 DAZ2Q13117 558 aaKnown RBP13.3□□□□□ -0.28
SSNA1-201ENST00000322310 TRAV12-3A0A0B4J271 114 aa13.29□□□□□ -0.28
SSNA1-201ENST00000322310 SMCO3A2RU48 225 aa13.29□□□□□ -0.28
SSNA1-201ENST00000322310 PMS2P5A8MQ11 134 aa13.29□□□□□ -0.28
SSNA1-201ENST00000322310 MRPS12O15235 138 aaKnown RBP13.29□□□□□ -0.28
SSNA1-201ENST00000322310 LINC00869P0C866 280 aa13.29□□□□□ -0.28
SSNA1-201ENST00000322310 ANXA3P12429 323 aa13.29□□□□□ -0.28
SSNA1-201ENST00000322310 SPANXN5Q5MJ07 72 aa13.29□□□□□ -0.28
SSNA1-201ENST00000322310 NAA50Q9GZZ1 169 aaKnown RBP13.29□□□□□ -0.28
SSNA1-201ENST00000322310 RPP30P78346 268 aaKnown RBP13.28□□□□□ -0.28
SSNA1-201ENST00000322310 CIB3Q96Q77 187 aaPredicted RBP13.28□□□□□ -0.28
SSNA1-201ENST00000322310 ZNF331Q9NQX6 463 aaPredicted RBP13.28□□□□□ -0.28
SSNA1-201ENST00000322310 LINC00854A0A1B0GVQ3 168 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 RGS5O15539 181 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 SYNGR2O43760 224 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 MED6O75586 246 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 ANXA7P20073 488 aaKnown RBP13.27□□□□□ -0.29
SSNA1-201ENST00000322310 PLP1P60201 277 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 SCGB3A2Q96PL1 93 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 GSN-AS1Q9NRJ2 163 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 SCP2D1Q9UJQ7 156 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 ICOSQ9Y6W8 199 aa13.27□□□□□ -0.29
SSNA1-201ENST00000322310 H3BTX0 84 aa13.26□□□□□ -0.29
SSNA1-201ENST00000322310 PATE2Q6UY27 113 aa13.26□□□□□ -0.29
SSNA1-201ENST00000322310 ARL6Q9H0F7 186 aa13.26□□□□□ -0.29
SSNA1-201ENST00000322310 MCUBQ9NWR8 336 aa13.26□□□□□ -0.29
SSNA1-201ENST00000322310 FUT9Q9Y231 359 aa13.26□□□□□ -0.29
SSNA1-201ENST00000322310 TRGV1A0A0A0MS02 117 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 DUXBA0A1W2PPF3 345 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 ANKRD20A5PA0PJZ0 165 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 SLC17A3O00476 420 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 CTDSP2O14595 271 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 PAX4O43316 350 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 CTF1Q16619 201 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 LCN15Q6UWW0 184 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 PYGO2Q9BRQ0 406 aa13.25□□□□□ -0.29
SSNA1-201ENST00000322310 ZNF324O75467 553 aaPredicted RBP13.24□□□□□ -0.29
SSNA1-201ENST00000322310 IGHV3-53P01767 116 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 CT45A10P0DMU9 189 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 SLC25A6P12236 298 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 CXCL2P19875 107 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 LYPD5Q6UWN5 251 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 ZBTB8BQ8NAP8 495 aaPredicted RBP13.24□□□□□ -0.29
SSNA1-201ENST00000322310 C11orf72Q8NBR9 251 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 ZNF431Q8TF32 576 aaPredicted RBP13.24□□□□□ -0.29
SSNA1-201ENST00000322310 SLC50A1Q9BRV3 221 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 TMEM70Q9BUB7 260 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 ARV1Q9H2C2 271 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 MSRB1Q9NZV6 116 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 STRAPQ9Y3F4 350 aaKnown RBP13.24□□□□□ -0.29
SSNA1-201ENST00000322310 LY96Q9Y6Y9 160 aa13.24□□□□□ -0.29
SSNA1-201ENST00000322310 HMCN2Q8NDA2 5059 aa13.23□□□□□ -0.29
SSNA1-201ENST00000322310 TRAV9-2A0A087WT02 112 aa13.23□□□□□ -0.29
SSNA1-201ENST00000322310 IL18Q14116 193 aa13.23□□□□□ -0.29
SSNA1-201ENST00000322310 LINC00467Q9BRT7 94 aa13.23□□□□□ -0.29
SSNA1-201ENST00000322310 IGLV5-52A0A0A0MRZ9 124 aa13.22□□□□□ -0.29
SSNA1-201ENST00000322310 CTDSPLO15194 276 aa13.22□□□□□ -0.29
SSNA1-201ENST00000322310 LEPP41159 167 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms