RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 RNASE4P34096 147 aaKnown RBP4.91□□□□□ -1.62
PRKDC-201ENST00000314191 C7orf71A4D174 169 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 FBLL1A6NHQ2 334 aaKnown RBP4.91□□□□□ -1.62
PRKDC-201ENST00000314191 CR1LQ2VPA4 569 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 IGHV4-61A0A0C4DH41 118 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 MSMBP08118 114 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 C3orf79P0CE67 100 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 OR10J3Q5JRS4 329 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 RNF182Q8N6D2 247 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 OR4X2Q8NGF9 303 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 CSPG4Q6UVK1 2322 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 SCGB1D4Q6XE38 83 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 ORMDL3Q8N138 153 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 LYPD1Q8N2G4 141 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 RHPN1-AS1Q9BWJ2 59 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 TYMSP04818 313 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 FXYD5Q96DB9 178 aa4.91□□□□□ -1.62
PRKDC-201ENST00000314191 SRSF8Q9BRL6 282 aaKnown RBP4.91□□□□□ -1.62
PRKDC-201ENST00000314191 A6NDN8 102 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 LCN12Q6JVE5 192 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 JKAMPQ9P055 326 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 IGHV2-5P01817 119 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 YPEL3P61236 119 aaPredicted RBP4.9□□□□□ -1.62
PRKDC-201ENST00000314191 TANC2Q9HCD6 1990 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 HLA-DMBP28068 263 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 OR11H6Q8NGC7 330 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 ZNF502Q8TBZ5 544 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 DEFB104AQ8WTQ1 72 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 EVI2AP22794 236 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 ZFP36P26651 326 aaKnown RBP4.9□□□□□ -1.62
PRKDC-201ENST00000314191 RAX2Q96IS3 184 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 ARMS2P0C7Q2 107 aa4.9□□□□□ -1.62
PRKDC-201ENST00000314191 COL5A1-AS1Q5SY13 56 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 NUDT3O95989 172 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 FBXL19-AS1Q494R0 122 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 BEX4Q9NWD9 120 aaPredicted RBP4.9□□□□□ -1.63
PRKDC-201ENST00000314191 ITLN2Q8WWU7 325 aaPredicted RBP4.9□□□□□ -1.63
PRKDC-201ENST00000314191 TMEM213A2RRL7 107 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 ZNF56Q15929 161 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 MCRIP2Q9BUT9 160 aaKnown RBP4.9□□□□□ -1.63
PRKDC-201ENST00000314191 ANAPC1Q9H1A4 1944 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 A0A1B0GW15 77 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 TEX22C9J3V5 150 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 PSMG4Q5JS54 123 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 NRGNQ92686 78 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 PLXND1Q9Y4D7 1925 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 TET2Q6N021 2002 aaPredicted RBP4.9□□□□□ -1.63
PRKDC-201ENST00000314191 TRAV21A0A0B4J279 112 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 IGHV4-39P01824 125 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 HOXB4P17483 251 aaPredicted RBP4.9□□□□□ -1.63
PRKDC-201ENST00000314191 DSCR9P59020 149 aa4.9□□□□□ -1.63
PRKDC-201ENST00000314191 EIF4EBP1Q13541 118 aaPredicted RBP4.9□□□□□ -1.63
PRKDC-201ENST00000314191 OVOL1O14753 267 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 D6R8Y8 96 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 ZNF414Q96IQ9 312 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 H3BRN7 92 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 C9orf139Q6ZV77 190 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 H3BVH4 76 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 C19orf84I3L1E1 186 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 NUP210Q8TEM1 1887 aaPredicted RBP4.89□□□□□ -1.63
PRKDC-201ENST00000314191 I3L2K1 104 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 ZNF688P0C7X2 276 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 SLC25A16P16260 332 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 TSPOP30536 169 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 C8orf49Q96NF6 230 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 MIEN1Q9BRT3 115 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 C1orf122Q6ZSJ8 110 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 SMIM12Q96EX1 92 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 NDUFAF3Q9BU61 184 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 TMEM249Q2WGJ8 235 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 EXPH5Q8NEV8 1989 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 CD7P09564 240 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 RPL24P83731 157 aaKnown RBP4.89□□□□□ -1.63
PRKDC-201ENST00000314191 TEX29Q8N6K0 151 aa4.89□□□□□ -1.63
PRKDC-201ENST00000314191 ZNF664Q8N3J9 261 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 SYT8Q8NBV8 401 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 SRSF9Q13242 221 aaKnown RBP eCLIP4.88□□□□□ -1.63
PRKDC-201ENST00000314191 Q1RN00 199 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 TRBV7-1A0A0A6YYK4 115 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 CENPVL3A0A0U1RRI6 287 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 PRSS46E5RG02 174 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 LDLRAD2Q5SZI1 272 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 AMN1Q8IY45 258 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 LINC01356Q8N9X3 169 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 PYGO2Q9BRQ0 406 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 HBDP02042 147 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 PRR25Q96S07 402 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 FOXC2Q99958 501 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 TMEM160Q9NX00 188 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 MYO18BQ8IUG5 2567 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 IGKV1-17P01599 117 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 FRMD6-AS1P0C7T7 363 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 ZNF492Q9P255 531 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 ZNF256Q9Y2P7 627 aaPredicted RBP4.88□□□□□ -1.63
PRKDC-201ENST00000314191 TMEM8BA6NDV4 472 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 LEPP41159 167 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 CDSNQ15517 529 aa4.88□□□□□ -1.63
PRKDC-201ENST00000314191 TTC9CQ8N5M4 171 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 242.6 ms