RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 IGHV3-7P01780 117 aa4.85□□□□□ -1.63
SEC22A-201ENST00000309934 LEAP2Q969E1 77 aa4.85□□□□□ -1.63
SEC22A-201ENST00000309934 PAXXQ9BUH6 204 aa4.85□□□□□ -1.63
SEC22A-201ENST00000309934 PRSS22Q9GZN4 317 aa4.85□□□□□ -1.63
SEC22A-201ENST00000309934 PCNX3Q9H6A9 2034 aa4.85□□□□□ -1.63
SEC22A-201ENST00000309934 TRAV8-6A0A0B4J262 113 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 IGHV1-69DA0A0B4J2H0 117 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 A0A1W2PRE2 83 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 MSGN1A6NI15 193 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 PRSS29PA6NIE9 313 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 IGHV1-69P01742 117 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 PAX9P55771 341 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 KIR3DS1Q14943 382 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 VWC2Q2TAL6 325 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 DEFB125Q8N687 156 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 NPBQ8NG41 125 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 C10orf105Q8TEF2 133 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 METTL26Q96S19 204 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 NDUFA4L2Q9NRX3 87 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 KLF12Q9Y4X4 402 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 NBASA2RRP1 2371 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 ALPK2Q86TB3 2170 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 PCSK5Q92824 1860 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 TRBV7-1A0A0A6YYK4 115 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 A0A0U1RQV1 116 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 F8WDY8 70 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 SRIP30626 198 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 HERVK_113P61574 105 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 FAM106AQ4KMX7 169 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 LCN12Q6JVE5 192 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 IGFBPL1Q8WX77 278 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 LIME1Q9H400 295 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 SLC25A22Q9H936 323 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 ZNF581Q9P0T4 197 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 RABAC1Q9UI14 185 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 SPTBN4Q9H254 2564 aa4.84□□□□□ -1.63
SEC22A-201ENST00000309934 TMEM89A2RUT3 159 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 VDAC2P45880 294 aaPredicted RBP4.84□□□□□ -1.64
SEC22A-201ENST00000309934 RND2P52198 227 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 DLX6P56179 175 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 RHOGP84095 191 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 SSMEM1Q8WWF3 244 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 BPESC1Q9GZL8 116 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 TMEM242Q9NWH2 141 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 C21orf62Q9NYP8 219 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 MED13Q9UHV7 2174 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 ABCA4P78363 2273 aa4.84□□□□□ -1.64
SEC22A-201ENST00000309934 F8W1H4 67 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 LYZP61626 148 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 ZCCHC24Q8N2G6 241 aaKnown RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 MCRIP2Q9BUT9 160 aaKnown RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 NHP2Q9NX24 153 aaKnown RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 CTSZQ9UBR2 303 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 LY96Q9Y6Y9 160 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 ZNF785A8K8V0 405 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 APCSP02743 223 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 ORM1P02763 201 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 IL4P05112 153 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 C1orf195Q5TG92 126 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 LYPD1Q8N2G4 141 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 FAM110DQ8TAY7 271 aaPredicted RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 FBXL15Q9H469 300 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 FAM157CP0CG43 387 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 PLA2G2AP14555 144 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 PAX1P15863 534 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 CMC4P56277 68 aaPredicted RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 MSMPQ1L6U9 139 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 BVES-AS1Q5T3Y7 98 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 ZC2HC1AQ96GY0 325 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 ARHGAP21Q5T5U3 1957 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 H3BRM9 83 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 TNFRSF13BO14836 293 aaPredicted RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 IGLV1-47P01700 117 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 SLC25A5P05141 298 aaKnown RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 C3orf79P0CE67 100 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 TFF3Q07654 80 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 LOXL1Q08397 574 aaPredicted RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 EIF4EBP1Q13541 118 aaPredicted RBP4.83□□□□□ -1.64
SEC22A-201ENST00000309934 SPINK9Q5DT21 86 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 OR10J3Q5JRS4 329 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 FAM159AQ6UWV7 190 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 Q6ZWC4 215 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 SDF2L1Q9HCN8 221 aa4.83□□□□□ -1.64
SEC22A-201ENST00000309934 TINCRA0A1B0GVN0 87 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 C15orf62A8K5M9 175 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 LYNX1G3V0Z9 82 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 TAX1BP3O14907 124 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 ZNF324O75467 553 aaPredicted RBP4.82□□□□□ -1.64
SEC22A-201ENST00000309934 NDUFC2O95298 119 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 IGKV1-39P01597 117 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 IGKV1D-39P04432 117 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 LYNX1P0DP58 116 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 RNASE2P10153 161 aaKnown RBP4.82□□□□□ -1.64
SEC22A-201ENST00000309934 GCHFRP30047 84 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 YPEL3P61236 119 aaPredicted RBP4.82□□□□□ -1.64
SEC22A-201ENST00000309934 DEFB113Q30KQ7 82 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 MRPL55Q7Z7F7 128 aaKnown RBP4.82□□□□□ -1.64
SEC22A-201ENST00000309934 SLC50A1Q9BRV3 221 aa4.82□□□□□ -1.64
SEC22A-201ENST00000309934 OVOL3O00110 214 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms