RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 C9orf139Q6ZV77 190 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 FAM223AQ8IWN6 122 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 OR1N2Q8NGR9 330 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 FNDC4Q9H6D8 234 aaPredicted RBP9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 F2Z2F3 143 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 PPBPP02775 128 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 CTAG1AP78358 180 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 NIT1Q86X76 327 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 CD7P09564 240 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 CD33P20138 364 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 ZNF138P52744 262 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 C1orf122Q6ZSJ8 110 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 Q86TA4 180 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 SELENOKQ9Y6D0 94 aa9.13□□□□□ -0.95
PCDHGC3-201ENST00000308177 ATP5LO75964 103 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 GATA3P23771 443 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 ADORA2A-AS1P86434 159 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 GTF2H5Q6ZYL4 71 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 C5orf30Q96GV9 206 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 IGLC7A0M8Q6 106 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 LSM4Q9Y4Z0 139 aaKnown RBP9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 PTPN13Q12923 2485 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 DUSP14O95147 198 aaKnown RBP9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 PRR31Q5SQ13 230 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 LYRM7Q5U5X0 104 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 THAP8Q8NA92 274 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 DUX3Q96PT4 197 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 IGLC1P0CG04 106 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 TMEM160Q9NX00 188 aa9.12□□□□□ -0.95
PCDHGC3-201ENST00000308177 H7C1H1 209 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 PSMG4Q5JS54 123 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 LYZL1Q6UWQ5 148 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 C11orf44Q8N8P7 122 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 RNF223E7ERA6 249 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 SMIM12Q96EX1 92 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 SH2D1AO60880 128 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 IGHV2-5P01817 119 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 ZNF114Q8NC26 417 aa9.11□□□□□ -0.95
PCDHGC3-201ENST00000308177 TRBV19A0A075B6N1 114 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 CR1LQ2VPA4 569 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 TMEM249Q2WGJ8 235 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 PYY3Q5JQD4 70 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 CHCHD1Q96BP2 118 aaKnown RBP9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 H3BVH4 76 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 GCSHP23434 173 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 CACNG7P62955 275 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 AMMECR1LQ6DCA0 310 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 MAPK1IP1LQ8NDC0 245 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 C11orf52Q96A22 123 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 LEPP41159 167 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 OR11H6Q8NGC7 330 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 SCGB3A1Q96QR1 104 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 HBDP02042 147 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 PAPPA-AS1Q5QFB9 102 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 CYB5R2Q6BCY4 276 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 WFDC12Q8WWY7 111 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 ST6GALNAC6Q969X2 333 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 LINC01587Q99440 93 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 FOXC2Q99958 501 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 RHPN1-AS1Q9BWJ2 59 aa9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 NXT2Q9NPJ8 142 aaKnown RBP9.1□□□□□ -0.95
PCDHGC3-201ENST00000308177 OVOL3O00110 214 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 ZNF688P0C7X2 276 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 DMRTC2Q8IXT2 367 aaPredicted RBP9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 PIP4P2Q8N4L2 257 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 PMCHL2Q9BQD1 86 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 PSMB2P49721 201 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 FBXL19-AS1Q494R0 122 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 OR11H1Q8NG94 326 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 OR11H2Q8NH07 326 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 TNFRSF18Q9Y5U5 241 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 NCKAP5O14513 1909 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 SSBP2P81877 361 aaPredicted RBP9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 LINC00477Q96M19 166 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 MIEN1Q9BRT3 115 aa9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
PCDHGC3-201ENST00000308177 C22orf34Q6ZV56 151 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 FXYD5Q96DB9 178 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 D6R8Y8 96 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 DAZ1Q9NQZ3 744 aaKnown RBP9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 TRAV8-6A0A0B4J262 113 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 EVI2AP22794 236 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 HIST1H4GQ99525 98 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 TMEM14CQ9P0S9 112 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 ZNF492Q9P255 531 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 DYSFO75923 2080 aa9.08□□□□□ -0.96
PCDHGC3-201ENST00000308177 TYMSP04818 313 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 ODF3L1Q8IXM7 274 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 TRAV9-2A0A087WT02 112 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 UBE2L6O14933 153 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 SNAI2O43623 268 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 C11orf1Q9H5F2 150 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 ZNF256Q9Y2P7 627 aaPredicted RBP9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 A0A1B0GV90 55 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms