RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ST20Q9HBF5 79 aa11.94□□□□□ -0.5
CSDC2-201ENST00000306149 TIMM8BQ9Y5J9 83 aaPredicted RBP11.94□□□□□ -0.5
CSDC2-201ENST00000306149 OR4C46A6NHA9 309 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 HTR1DP28221 377 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 FCGR2BP31994 310 aaPredicted RBP11.93□□□□□ -0.5
CSDC2-201ENST00000306149 NBL1P41271 181 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 ZC2HC1AQ96GY0 325 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 SYS1-DBNDD2H3BUS1 97 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 HAX1O00165 279 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 CHEK1O14757 476 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 APOHP02749 345 aaPredicted RBP11.93□□□□□ -0.5
CSDC2-201ENST00000306149 LIPFP07098 398 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 MCRIP2Q9BUT9 160 aaKnown RBP11.93□□□□□ -0.5
CSDC2-201ENST00000306149 COX11Q9Y6N1 276 aa11.93□□□□□ -0.5
CSDC2-201ENST00000306149 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 CSN3P07498 182 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 TPPP3Q9BW30 176 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 TRBV19A0A075B6N1 114 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 CCL21O00585 134 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 LEPROTL1O95214 131 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 SHANK2-AS3Q9BTD1 123 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 DPM3Q9P2X0 92 aa11.92□□□□□ -0.5
CSDC2-201ENST00000306149 SPTAN1Q13813 2472 aaKnown RBP11.92□□□□□ -0.5
CSDC2-201ENST00000306149 NBR2O15453 112 aa11.91□□□□□ -0.5
CSDC2-201ENST00000306149 OR5AL1P0C617 328 aa11.91□□□□□ -0.5
CSDC2-201ENST00000306149 BPIFA4PQ86YQ2 179 aa11.91□□□□□ -0.5
CSDC2-201ENST00000306149 RNF125Q96EQ8 232 aa11.91□□□□□ -0.5
CSDC2-201ENST00000306149 UNQ5815/PRO19632Q6UWF5 114 aa11.91□□□□□ -0.5
CSDC2-201ENST00000306149 NCOR2Q9Y618 2525 aa11.91□□□□□ -0.5
CSDC2-201ENST00000306149 CHD8Q9HCK8 2581 aa11.91□□□□□ -0.5
CSDC2-201ENST00000306149 OVOL3O00110 214 aa11.9□□□□□ -0.5
CSDC2-201ENST00000306149 ARMS2P0C7Q2 107 aa11.9□□□□□ -0.5
CSDC2-201ENST00000306149 SIGLEC15Q6ZMC9 328 aa11.9□□□□□ -0.5
CSDC2-201ENST00000306149 Q6ZVH6 145 aa11.9□□□□□ -0.5
CSDC2-201ENST00000306149 ZNF738Q8NE65 137 aa11.9□□□□□ -0.5
CSDC2-201ENST00000306149 H0Y8G0 127 aa11.9□□□□□ -0.5
CSDC2-201ENST00000306149 HLA-DRB1P01911 266 aa11.9□□□□□ -0.5
CSDC2-201ENST00000306149 CFHR4Q92496 578 aa11.9□□□□□ -0.5
CSDC2-201ENST00000306149 H3BRN7 92 aa11.9□□□□□ -0.51
CSDC2-201ENST00000306149 CRIP1P50238 77 aa11.9□□□□□ -0.51
CSDC2-201ENST00000306149 TMEM75Q8N9X5 138 aa11.9□□□□□ -0.51
CSDC2-201ENST00000306149 GATD1Q8NB37 220 aa11.9□□□□□ -0.51
CSDC2-201ENST00000306149 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.51
CSDC2-201ENST00000306149 TMEM191AQ9H0A3 160 aa11.9□□□□□ -0.51
CSDC2-201ENST00000306149 PSG8Q9UQ74 426 aa11.9□□□□□ -0.51
CSDC2-201ENST00000306149 ZFHX3Q15911 3703 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 IGHV3OR16-8A0A075B7F1 116 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.89□□□□□ -0.51
CSDC2-201ENST00000306149 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
CSDC2-201ENST00000306149 CCL25O15444 150 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 GNG7O60262 68 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
CSDC2-201ENST00000306149 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 SRSF8Q9BRL6 282 aaKnown RBP11.89□□□□□ -0.51
CSDC2-201ENST00000306149 TMSB15BA0A087X1C1 80 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 RNF5Q99942 180 aa11.89□□□□□ -0.51
CSDC2-201ENST00000306149 IGHV3-35A0A0C4DH35 117 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 NDPQ00604 133 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 UBE2V1Q13404 147 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 PET117Q6UWS5 81 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 ZNF414Q96IQ9 312 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 FANCD2OSQ96PS1 177 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 RNF24Q9Y225 148 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 MUC21A0A0G2JKD1 596 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 MUC21A0A140T8X8 626 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 MUC21Q5SSG8 566 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 MAP1LC3CQ9BXW4 147 aa11.88□□□□□ -0.51
CSDC2-201ENST00000306149 MAP1AP78559 2803 aaPredicted RBP11.87□□□□□ -0.51
CSDC2-201ENST00000306149 A0A1B0GUT8 65 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 hDV102S1A0JD36 115 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 PMCHL2Q9BQD1 86 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 LOC105371242A0A075B767 164 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 MRPS12O15235 138 aaKnown RBP11.87□□□□□ -0.51
CSDC2-201ENST00000306149 PSG3Q16557 428 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 C5orf64Q2M2E5 130 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 IGFL4Q6B9Z1 124 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 OR11H6Q8NGC7 330 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 TMUB1Q9BVT8 246 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 RAB1BQ9H0U4 201 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 HSPB8Q9UJY1 196 aa11.87□□□□□ -0.51
CSDC2-201ENST00000306149 HIVEP3Q5T1R4 2406 aa11.86□□□□□ -0.51
CSDC2-201ENST00000306149 A0A1B0GW15 77 aa11.86□□□□□ -0.51
CSDC2-201ENST00000306149 RBX1P62877 108 aa11.86□□□□□ -0.51
CSDC2-201ENST00000306149 RIGQ13278 110 aa11.86□□□□□ -0.51
CSDC2-201ENST00000306149 LYPD1Q8N2G4 141 aa11.86□□□□□ -0.51
CSDC2-201ENST00000306149 CELSR1Q9NYQ6 3014 aa11.86□□□□□ -0.51
CSDC2-201ENST00000306149 HSBP1L1C9JCN9 74 aa11.86□□□□□ -0.51
CSDC2-201ENST00000306149 SLC25A34Q6PIV7 304 aa11.86□□□□□ -0.51
CSDC2-201ENST00000306149 F8W735 103 aaPredicted RBP11.85□□□□□ -0.51
CSDC2-201ENST00000306149 TIMD4Q96H15 378 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 SCRT2Q9NQ03 307 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 COL12A1Q99715 3063 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 OR2T8A6NH00 312 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 K7EQM0 130 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms