RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 Q8TAT8 98 aa13.02□□□□□ -0.33
ARHGEF28-201ENST00000296794 ITGB1BP1O14713 200 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 SH2D1AO60880 128 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 RNASE1P07998 156 aaKnown RBP13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 PSG3Q16557 428 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 HAPLN4Q86UW8 402 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 ZNF815PA8K554 130 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 DNAL4O96015 105 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 C20orf144Q9BQM9 153 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 MCRIP2Q9BUT9 160 aaKnown RBP13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 SMPXQ9UHP9 88 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 COL8A2P25067 703 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 TMEM14BQ9NUH8 114 aa13.01□□□□□ -0.33
ARHGEF28-201ENST00000296794 VCX2Q9H322 139 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 SELENOKQ9Y6D0 94 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 HOXA3O43365 443 aaPredicted RBP13□□□□□ -0.33
ARHGEF28-201ENST00000296794 LAGE3Q14657 143 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 LYPD2Q6UXB3 125 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 SIGLEC15Q6ZMC9 328 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 Q86TA4 180 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 TMEM101Q96IK0 257 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 BUB1B-PAK6H3BSN5 160 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 SNHG12Q9BXW3 62 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 H3BRM9 83 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 IFI27P40305 119 aaPredicted RBP13□□□□□ -0.33
ARHGEF28-201ENST00000296794 OR13C6PQ8NH95 151 aa13□□□□□ -0.33
ARHGEF28-201ENST00000296794 SHANK1Q9Y566 2161 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 CMC4P56277 68 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 SLC25A2Q9BXI2 301 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 BCL6BQ8N143 479 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 A0A1W2PPI3 338 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 UBE2V1Q13404 147 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 C5orf64Q2M2E5 130 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 LYPD6BQ8NI32 183 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 GTF3C1Q12789 2109 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 RNF223E7ERA6 249 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 TSPAN13O95857 204 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 Q6ZR03 302 aa12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 MRPS16Q9Y3D3 137 aaKnown RBP12.99□□□□□ -0.33
ARHGEF28-201ENST00000296794 ZNF114Q8NC26 417 aa12.98□□□□□ -0.33
ARHGEF28-201ENST00000296794 GATA3P23771 443 aa12.98□□□□□ -0.33
ARHGEF28-201ENST00000296794 LINC01559Q495D7 138 aa12.98□□□□□ -0.33
ARHGEF28-201ENST00000296794 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF28-201ENST00000296794 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
ARHGEF28-201ENST00000296794 ARFGEF3Q5TH69 2177 aa12.98□□□□□ -0.33
ARHGEF28-201ENST00000296794 OVOL1O14753 267 aa12.98□□□□□ -0.33
ARHGEF28-201ENST00000296794 SAP30O75446 220 aa12.98□□□□□ -0.33
ARHGEF28-201ENST00000296794 Q5PR19 223 aa12.97□□□□□ -0.33
ARHGEF28-201ENST00000296794 IGFL4Q6B9Z1 124 aa12.97□□□□□ -0.33
ARHGEF28-201ENST00000296794 AMN1Q8IY45 258 aa12.97□□□□□ -0.33
ARHGEF28-201ENST00000296794 SONP18583 2426 aaKnown RBP12.97□□□□□ -0.33
ARHGEF28-201ENST00000296794 PRTN3P24158 256 aa12.97□□□□□ -0.33
ARHGEF28-201ENST00000296794 CEACAM8P31997 349 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF28-201ENST00000296794 DOCK9Q9BZ29 2069 aa12.97□□□□□ -0.33
ARHGEF28-201ENST00000296794 MSMBP08118 114 aa12.96□□□□□ -0.33
ARHGEF28-201ENST00000296794 YPEL3P61236 119 aaPredicted RBP12.96□□□□□ -0.33
ARHGEF28-201ENST00000296794 C3orf56Q8N813 242 aa12.96□□□□□ -0.33
ARHGEF28-201ENST00000296794 WFDC12Q8WWY7 111 aa12.96□□□□□ -0.33
ARHGEF28-201ENST00000296794 Q6ZWC4 215 aa12.96□□□□□ -0.33
ARHGEF28-201ENST00000296794 GFRA4Q9GZZ7 299 aa12.96□□□□□ -0.33
ARHGEF28-201ENST00000296794 SMKR1H3BMG3 65 aa12.96□□□□□ -0.33
ARHGEF28-201ENST00000296794 NOTCH4Q99466 2003 aa12.96□□□□□ -0.33
ARHGEF28-201ENST00000296794 GGTLC3B5MD39 225 aa12.96□□□□□ -0.34
ARHGEF28-201ENST00000296794 ARMS2P0C7Q2 107 aa12.96□□□□□ -0.34
ARHGEF28-201ENST00000296794 TRAV8-2A0A0B4J237 113 aa12.96□□□□□ -0.34
ARHGEF28-201ENST00000296794 V9GYV3 84 aa12.96□□□□□ -0.34
ARHGEF28-201ENST00000296794 TRAV2A0A0B4J234 112 aa12.95□□□□□ -0.34
ARHGEF28-201ENST00000296794 NDUFA4L2Q9NRX3 87 aa12.95□□□□□ -0.34
ARHGEF28-201ENST00000296794 DOCK11Q5JSL3 2073 aa12.95□□□□□ -0.34
ARHGEF28-201ENST00000296794 TCF15Q12870 199 aa12.95□□□□□ -0.34
ARHGEF28-201ENST00000296794 GAGE13Q4V321 117 aa12.95□□□□□ -0.34
ARHGEF28-201ENST00000296794 SHANK2-AS3Q9BTD1 123 aa12.95□□□□□ -0.34
ARHGEF28-201ENST00000296794 RNF114Q9Y508 228 aa12.95□□□□□ -0.34
ARHGEF28-201ENST00000296794 C10orf126Q8N4M7 172 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 SIGMAR1Q99720 223 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 TOMM7Q9P0U1 55 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 TICRRQ7Z2Z1 1910 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 IGKV3D-20A0A0C4DH25 116 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 C3orf36Q3SXR2 165 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 OTOGLQ3ZCN5 2332 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 IGHV4-39P01824 125 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 SAA4P35542 130 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 TMEM158Q8WZ71 300 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 ZNF492Q9P255 531 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 COX11Q9Y6N1 276 aa12.94□□□□□ -0.34
ARHGEF28-201ENST00000296794 MYO18BQ8IUG5 2567 aa12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 KIR3DS1Q14943 382 aa12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 LSM4Q9Y4Z0 139 aaKnown RBP12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 PTPN13Q12923 2485 aa12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 C15orf65H3BRN8 121 aa12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 NDPQ00604 133 aa12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 C17orf58Q2M2W7 97 aa12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 DUX4L9Q6RFH8 374 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 MALRD1Q5VYJ5 2156 aa12.93□□□□□ -0.34
ARHGEF28-201ENST00000296794 SLAQ13239 276 aa12.92□□□□□ -0.34
ARHGEF28-201ENST00000296794 ZC2HC1BQ5TFG8 222 aa12.92□□□□□ -0.34
ARHGEF28-201ENST00000296794 USMG5Q96IX5 58 aa12.92□□□□□ -0.34
ARHGEF28-201ENST00000296794 CD5LO43866 347 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms