RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 KCNIP4Q6PIL6 250 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 FAM223AQ8IWN6 122 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 TCEAL7Q9BRU2 100 aa12.89□□□□□ -0.35
HIF3A-203ENST00000291300 SONP18583 2426 aaKnown RBP12.88□□□□□ -0.35
HIF3A-203ENST00000291300 BMPR1BO00238 502 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 PF4V1P10720 104 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 HLA-DMBP28068 263 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 IBA57Q5T440 356 aaKnown RBP12.88□□□□□ -0.35
HIF3A-203ENST00000291300 CYB5R2Q6BCY4 276 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 OR8I2Q8N0Y5 310 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 IMMP2LQ96T52 175 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 OSTCQ9NRP0 149 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 AP4M1O00189 453 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 TYMSP04818 313 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 S100A6P06703 90 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 TCL1AP56279 114 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 FABP9Q0Z7S8 132 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 Q6YL49 198 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 DUX5Q96PT3 197 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 MLST8Q9BVC4 326 aa12.88□□□□□ -0.35
HIF3A-203ENST00000291300 BUB3O43684 328 aa12.87□□□□□ -0.35
HIF3A-203ENST00000291300 SPINK4O60575 86 aa12.87□□□□□ -0.35
HIF3A-203ENST00000291300 SCGB2A1O75556 95 aa12.87□□□□□ -0.35
HIF3A-203ENST00000291300 LTAP01374 205 aa12.87□□□□□ -0.35
HIF3A-203ENST00000291300 IGLV1-40P01703 118 aa12.87□□□□□ -0.35
HIF3A-203ENST00000291300 NDUFA6P56556 154 aa12.87□□□□□ -0.35
HIF3A-203ENST00000291300 SERTAD4Q9NUC0 356 aa12.87□□□□□ -0.35
HIF3A-203ENST00000291300 UNC79Q9P2D8 2635 aa12.87□□□□□ -0.35
HIF3A-203ENST00000291300 ZNF785A8K8V0 405 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 HOXA3O43365 443 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-203ENST00000291300 SLC35B1P78383 322 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 UNQ9165/PRO28630Q6UXU0 137 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 C9orf139Q6ZV77 190 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 NUDT10Q8NFP7 164 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 CMTM2Q8TAZ6 248 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 NUDT11Q96G61 164 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 GPR82Q96P67 336 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 CUBNO60494 3623 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 IGHG4P01861 327 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 PRNTQ86SH4 94 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 Q86TA4 180 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 FMC1Q96HJ9 113 aa12.86□□□□□ -0.35
HIF3A-203ENST00000291300 RPL7P18124 248 aaKnown RBP12.85□□□□□ -0.35
HIF3A-203ENST00000291300 ARL3P36405 182 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 AKR1D1P51857 326 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 RPEL1Q2QD12 228 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 GFI1BQ5VTD9 330 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 GAR1Q9NY12 217 aaKnown RBP12.85□□□□□ -0.35
HIF3A-203ENST00000291300 ZNF705GA8MUZ8 300 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-203ENST00000291300 DIRC3C9JPN6 131 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 UBE2CO00762 179 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 RAB9AP51151 201 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 VPREB3Q9UKI3 123 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 ACANP16112 2415 aa12.85□□□□□ -0.35
HIF3A-203ENST00000291300 ACTL10Q5JWF8 245 aa12.84□□□□□ -0.35
HIF3A-203ENST00000291300 RNF24Q9Y225 148 aa12.84□□□□□ -0.35
HIF3A-203ENST00000291300 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.35
HIF3A-203ENST00000291300 IFITM10A6NMD0 228 aa12.83□□□□□ -0.35
HIF3A-203ENST00000291300 ZNF705FA8MVS1 300 aaPredicted RBP12.83□□□□□ -0.35
HIF3A-203ENST00000291300 BRI3O95415 125 aa12.83□□□□□ -0.35
HIF3A-203ENST00000291300 LYPD1Q8N2G4 141 aa12.83□□□□□ -0.35
HIF3A-203ENST00000291300 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.35
HIF3A-203ENST00000291300 H3BUA1 57 aa12.83□□□□□ -0.36
HIF3A-203ENST00000291300 CBLN1P23435 193 aa12.83□□□□□ -0.36
HIF3A-203ENST00000291300 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.36
HIF3A-203ENST00000291300 PDE6HQ13956 83 aa12.83□□□□□ -0.36
HIF3A-203ENST00000291300 S100A7AQ86SG5 101 aa12.83□□□□□ -0.36
HIF3A-203ENST00000291300 HECTD1Q9ULT8 2610 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 IGKV2-40A0A087WW87 121 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-203ENST00000291300 SMIM27A0A1W2PRY6 76 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 IGKV2D-40P01614 121 aaPredicted RBP12.82□□□□□ -0.36
HIF3A-203ENST00000291300 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 OR5R1Q8NH85 324 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 SELENOKQ9Y6D0 94 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 U3KQE9 123 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 USMG5Q96IX5 58 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 ZNF702PQ9H963 129 aa12.82□□□□□ -0.36
HIF3A-203ENST00000291300 GATCO43716 136 aaKnown RBP12.81□□□□□ -0.36
HIF3A-203ENST00000291300 EDN2P20800 178 aa12.81□□□□□ -0.36
HIF3A-203ENST00000291300 PSMB8P28062 276 aa12.81□□□□□ -0.36
HIF3A-203ENST00000291300 PSG3Q16557 428 aa12.81□□□□□ -0.36
HIF3A-203ENST00000291300 SIGLECL1Q8N7X8 197 aa12.81□□□□□ -0.36
HIF3A-203ENST00000291300 ZC2HC1AQ96GY0 325 aa12.81□□□□□ -0.36
HIF3A-203ENST00000291300 METTL26Q96S19 204 aa12.81□□□□□ -0.36
HIF3A-203ENST00000291300 AAMDCQ9H7C9 122 aa12.81□□□□□ -0.36
HIF3A-203ENST00000291300 ZNF331Q9NQX6 463 aaPredicted RBP12.81□□□□□ -0.36
HIF3A-203ENST00000291300 PSG8Q9UQ74 426 aa12.81□□□□□ -0.36
HIF3A-203ENST00000291300 FASNP49327 2511 aaKnown RBP12.81□□□□□ -0.36
HIF3A-203ENST00000291300 ANK3Q12955 4377 aaKnown RBP12.81□□□□□ -0.36
HIF3A-203ENST00000291300 C19orf71A6NCJ1 209 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 S100A9P06702 114 aaKnown RBP12.8□□□□□ -0.36
HIF3A-203ENST00000291300 HOXA5P20719 270 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 PDZD11Q5EBL8 140 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 TMEM183AQ8IXX5 376 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 TMEM75Q8N9X5 138 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 C8orf49Q96NF6 230 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 TRAPPC1Q9Y5R8 145 aa12.8□□□□□ -0.36
HIF3A-203ENST00000291300 PRAC2D3DTV9 90 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms