RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 GDF5OSQ5U4N7 250 aa15□□□□□ -0.01
BRAF-201ENST00000288602 C2orf88Q9BSF0 95 aa15□□□□□ -0.01
BRAF-201ENST00000288602 ZNF331Q9NQX6 463 aaPredicted RBP15□□□□□ -0.01
BRAF-201ENST00000288602 SERF1AO75920 110 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 P01737 135 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 CAMPP49913 170 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 RPL19P84098 196 aaKnown RBP14.99□□□□□ -0.01
BRAF-201ENST00000288602 SLAQ13239 276 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 WDR73Q6P4I2 378 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 ZNF664Q8N3J9 261 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 NOL4LQ96MY1 436 aaPredicted RBP14.99□□□□□ -0.01
BRAF-201ENST00000288602 SPOCK3Q9BQ16 436 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 RPP21Q9H633 154 aaKnown RBP14.99□□□□□ -0.01
BRAF-201ENST00000288602 CSPG4Q6UVK1 2322 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 C19orf71A6NCJ1 209 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 ZNF124Q15973 351 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 BAGE3Q86Y29 109 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 SMIM12Q96EX1 92 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 CCDC140Q96MF4 163 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 SSBP4Q9BWG4 385 aaPredicted RBP14.99□□□□□ -0.01
BRAF-201ENST00000288602 RABAC1Q9UI14 185 aa14.99□□□□□ -0.01
BRAF-201ENST00000288602 ZANQ9Y493 2812 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 IGHV3OR16-13A0A075B7E8 117 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 IGHV3-74A0A0B4J1X5 117 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 IGHV3-66A0A0C4DH42 116 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 AVPP01185 164 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 MSMBP08118 114 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 CD33P20138 364 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 TOMM20LQ6UXN7 152 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 VN1R17PQ8TDU5 208 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 GTSF1Q8WW33 167 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 DAZAP1Q96EP5 407 aaKnown RBP14.98□□□□□ -0.01
BRAF-201ENST00000288602 PRSS22Q9GZN4 317 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 RNF24Q9Y225 148 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 MOB4Q9Y3A3 225 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 USP9YO00507 2555 aaPredicted RBP14.98□□□□□ -0.01
BRAF-201ENST00000288602 ANKRD17O75179 2603 aaKnown RBP14.98□□□□□ -0.01
BRAF-201ENST00000288602 A8MWP6 167 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 ZC2HC1AQ96GY0 325 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 SMAD5-AS1Q9Y6J3 95 aa14.98□□□□□ -0.01
BRAF-201ENST00000288602 ZNF785A8K8V0 405 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 DIRC3C9JPN6 131 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 BMPR1BO00238 502 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 SRSF1Q07955 248 aaKnown RBP eCLIP14.97□□□□□ -0.01
BRAF-201ENST00000288602 TXN2Q99757 166 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 HIF1ANQ9NWT6 349 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 GOSR1O95249 250 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 MT-ND6P03923 174 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 COL8A1P27658 744 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 SRIP30626 198 aa14.97□□□□□ -0.01
BRAF-201ENST00000288602 APCSP02743 223 aa14.96□□□□□ -0.01
BRAF-201ENST00000288602 MAPK1IP1LQ8NDC0 245 aa14.96□□□□□ -0.01
BRAF-201ENST00000288602 PGLYRP4Q96LB8 373 aa14.96□□□□□ -0.01
BRAF-201ENST00000288602 AAMDCQ9H7C9 122 aa14.96□□□□□ -0.01
BRAF-201ENST00000288602 PSG8Q9UQ74 426 aa14.96□□□□□ -0.01
BRAF-201ENST00000288602 UBR5O95071 2799 aaPredicted RBP14.96□□□□□ -0.02
BRAF-201ENST00000288602 H3BUX3 64 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 ZNF207O43670 478 aaKnown RBP14.95□□□□□ -0.02
BRAF-201ENST00000288602 HLA-DQA1P01909 254 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 HLA-DMBP28068 263 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 PSG3Q16557 428 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 LYPD1Q8N2G4 141 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 ZNF843Q8N446 348 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 IGHV3-49A0A0A0MS15 119 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 SCGB2A1O75556 95 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 S100A7AQ86SG5 101 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 TMEM75Q8N9X5 138 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 RCHY1Q96PM5 261 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 MEGF9Q9H1U4 602 aa14.95□□□□□ -0.02
BRAF-201ENST00000288602 TRAV41A0A0B4J266 112 aa14.94□□□□□ -0.02
BRAF-201ENST00000288602 C8orf49Q96NF6 230 aa14.94□□□□□ -0.02
BRAF-201ENST00000288602 NDUFAF3Q9BU61 184 aa14.94□□□□□ -0.02
BRAF-201ENST00000288602 ZFAND3Q9H8U3 227 aa14.94□□□□□ -0.02
BRAF-201ENST00000288602 ZNF492Q9P255 531 aa14.94□□□□□ -0.02
BRAF-201ENST00000288602 IGKV2-40A0A087WW87 121 aaPredicted RBP14.94□□□□□ -0.02
BRAF-201ENST00000288602 IGKV2D-40P01614 121 aaPredicted RBP14.94□□□□□ -0.02
BRAF-201ENST00000288602 RPL7P18124 248 aaKnown RBP14.94□□□□□ -0.02
BRAF-201ENST00000288602 LBHQ53QV2 105 aaPredicted RBP14.94□□□□□ -0.02
BRAF-201ENST00000288602 OR2D3Q8NGH3 330 aa14.94□□□□□ -0.02
BRAF-201ENST00000288602 TCAPO15273 167 aa14.93□□□□□ -0.02
BRAF-201ENST00000288602 ZNF705FA8MVS1 300 aaPredicted RBP14.93□□□□□ -0.02
BRAF-201ENST00000288602 A8MWL6 223 aa14.93□□□□□ -0.02
BRAF-201ENST00000288602 K7EQM0 130 aa14.93□□□□□ -0.02
BRAF-201ENST00000288602 APOHP02749 345 aaPredicted RBP14.93□□□□□ -0.02
BRAF-201ENST00000288602 Q0VG73 95 aa14.93□□□□□ -0.02
BRAF-201ENST00000288602 PDE6HQ13956 83 aa14.93□□□□□ -0.02
BRAF-201ENST00000288602 Q6ZS46 218 aa14.93□□□□□ -0.02
BRAF-201ENST00000288602 ZNF253O75346 499 aa14.92□□□□□ -0.02
BRAF-201ENST00000288602 CRIP1P50238 77 aa14.92□□□□□ -0.02
BRAF-201ENST00000288602 IQCJQ1A5X6 159 aa14.92□□□□□ -0.02
BRAF-201ENST00000288602 COX19Q49B96 90 aa14.92□□□□□ -0.02
BRAF-201ENST00000288602 EEF1AKMT3Q96AZ1 226 aa14.92□□□□□ -0.02
BRAF-201ENST00000288602 EREGO14944 169 aa14.92□□□□□ -0.02
BRAF-201ENST00000288602 BLCAPP62952 87 aa14.92□□□□□ -0.02
BRAF-201ENST00000288602 WIPF2Q8TF74 440 aaPredicted RBP14.92□□□□□ -0.02
BRAF-201ENST00000288602 CLPSL1A2RUU4 121 aa14.91□□□□□ -0.02
BRAF-201ENST00000288602 PTPN13Q12923 2485 aa14.91□□□□□ -0.02
BRAF-201ENST00000288602 ABCA12Q86UK0 2595 aa14.91□□□□□ -0.02
BRAF-201ENST00000288602 B4DSR2 109 aa14.91□□□□□ -0.02
BRAF-201ENST00000288602 NPIPB6E9PJ23 425 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms