RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 C2orf48Q96LS8 159 aa8.44□□□□□ -1.06
ERGIC3-201ENST00000279052 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
ERGIC3-201ENST00000279052 TRAV17A0A0B4J275 112 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 MYCNOSP40205 109 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 FAM110DQ8TAY7 271 aaPredicted RBP8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 SHANK2-AS3Q9BTD1 123 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 SLC25A10Q9UBX3 287 aaPredicted RBP8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 ARHGEF17Q96PE2 2063 aaPredicted RBP8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 H7C1H1 209 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 MIC13Q5XKP0 118 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 Q6ZPA2 131 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 MRPL20Q9BYC9 149 aaKnown RBP8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 ZNF442Q9H7R0 627 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 PLEKHA3Q9HB20 300 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 THADAQ6YHU6 1953 aa8.43□□□□□ -1.06
ERGIC3-201ENST00000279052 ZIC3O60481 467 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 SLC25A48Q6ZT89 311 aaKnown RBP8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 GTSCR1Q86UQ5 136 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 C11orf53Q8IXP5 236 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 RPP25Q9BUL9 199 aaKnown RBP8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 KLF13Q9Y2Y9 288 aaPredicted RBP8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 TANC2Q9HCD6 1990 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 A8MZ25 164 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 H3BMM0 161 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 UBE2D1P51668 147 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 CT83Q5H943 113 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 Q71RC1 249 aaPredicted RBP8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 UBE2WQ96B02 151 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 NABP2Q9BQ15 211 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 A0A0C4DFX4 3053 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 KNL1Q8NG31 2342 aa8.42□□□□□ -1.06
ERGIC3-201ENST00000279052 C2orf16Q68DN1 1984 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 CA6P23280 308 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 DRAM1Q8N682 238 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 TGFBR3LH3BV60 316 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 ATOX1O00244 68 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 MAPKAPK5-AS1Q8N8E1 139 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 PGLYRP4Q96LB8 373 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 GFRA4Q9GZZ7 299 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 HEATR1Q9H583 2144 aaKnown RBP8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 RPP21Q9H633 154 aaKnown RBP8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 ALPK2Q86TB3 2170 aa8.41□□□□□ -1.06
ERGIC3-201ENST00000279052 WI2-2373I1.2A0A1W2PRP0 233 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 FRG2CA6NGY1 282 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 IFI27P40305 119 aaPredicted RBP8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 ZNF542PQ5EBM4 170 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 ASPHD1Q5U4P2 390 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 LINC00311Q8N616 119 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 RPUSD1Q9UJJ7 312 aaKnown RBP8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 TEX49A0A1B0GTD5 131 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 HERVK_113P61574 105 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 TWIST1Q15672 202 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 KRTAP27-1Q3LI81 207 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 C10orf105Q8TEF2 133 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 MGST2Q99735 147 aa8.4□□□□□ -1.06
ERGIC3-201ENST00000279052 A0A0U1RQV1 116 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 PEX7O00628 323 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 LOXL1Q08397 574 aaPredicted RBP8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 PLPPR2Q96GM1 343 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 AGRNO00468 2067 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 MRPS12O15235 138 aaKnown RBP8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 FOXS1O43638 330 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 NDUFC2O95298 119 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 FKBP2P26885 142 aaKnown RBP8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 PSMB8P28062 276 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 CDSNQ15517 529 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 PIGYQ3MUY2 71 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 HES3Q5TGS1 186 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 NCBP2LA6PVI3 153 aaKnown RBP8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 TFF2Q03403 129 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 TMEM170BQ5T4T1 132 aa8.39□□□□□ -1.07
ERGIC3-201ENST00000279052 NXPH1P58417 271 aa8.38□□□□□ -1.07
ERGIC3-201ENST00000279052 TMEM92Q6UXU6 159 aa8.38□□□□□ -1.07
ERGIC3-201ENST00000279052 LINC01561Q8N1V8 128 aa8.38□□□□□ -1.07
ERGIC3-201ENST00000279052 DPH3P1Q9H4G8 78 aa8.38□□□□□ -1.07
ERGIC3-201ENST00000279052 CHD9Q3L8U1 2897 aa8.38□□□□□ -1.07
ERGIC3-201ENST00000279052 UBE2L3P68036 154 aaKnown RBP8.38□□□□□ -1.07
ERGIC3-201ENST00000279052 IGLV3-21P80748 117 aaPredicted RBP8.38□□□□□ -1.07
ERGIC3-201ENST00000279052 USP34Q70CQ2 3546 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 PGPA6NDG6 321 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 PYYP10082 97 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 ERVK-16P61578 105 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 Q6ZSR3 168 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 CYSTM1Q9H1C7 97 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 CDH23Q9H251 3354 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 CACNA1IQ9P0X4 2223 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 CXCL5P42830 114 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 MDP1Q86V88 176 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 FGFBP3Q8TAT2 258 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 SSMEM1Q8WWF3 244 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 RTL8AQ9BWD3 113 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 UNC80Q8N2C7 3258 aa8.37□□□□□ -1.07
ERGIC3-201ENST00000279052 ZNF883P0CG24 379 aa8.36□□□□□ -1.07
ERGIC3-201ENST00000279052 WFDC11Q8NEX6 87 aa8.36□□□□□ -1.07
ERGIC3-201ENST00000279052 SPAG17Q6Q759 2223 aa8.36□□□□□ -1.07
ERGIC3-201ENST00000279052 INS-IGF2F8WCM5 200 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms