RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 FAM223AQ8IWN6 122 aa15.99■□□□□ 0.15
LYSMD2-201ENST00000267838 CCDC140Q96MF4 163 aa15.99■□□□□ 0.15
LYSMD2-201ENST00000267838 SHANK2-AS3Q9BTD1 123 aa15.99■□□□□ 0.15
LYSMD2-201ENST00000267838 TRBV7-1A0A0A6YYK4 115 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 ISLRO14498 428 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 SUMO1P63165 101 aaKnown RBP15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 USF2Q15853 346 aaPredicted RBP15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 C1orf194Q5T5A4 169 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 VPREB3Q9UKI3 123 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 CREBBPQ92793 2442 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 PDZD2O15018 2839 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 H3BUA1 57 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 BRI3O95415 125 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 TRGV3P03979 118 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 CLEC3BP05452 202 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 TMEM14CQ9P0S9 112 aa15.98■□□□□ 0.15
LYSMD2-201ENST00000267838 KIR2DL5BA0A0G2JN68 375 aa15.97■□□□□ 0.15
LYSMD2-201ENST00000267838 KIR2DL5BA0A0G2JPC4 375 aa15.97■□□□□ 0.15
LYSMD2-201ENST00000267838 A0A1B0GV90 55 aa15.97■□□□□ 0.15
LYSMD2-201ENST00000267838 SNURFLB1AK76 121 aa15.97■□□□□ 0.15
LYSMD2-201ENST00000267838 CLEC19AQ6UXS0 136 aa15.97■□□□□ 0.15
LYSMD2-201ENST00000267838 S100A7AQ86SG5 101 aa15.97■□□□□ 0.15
LYSMD2-201ENST00000267838 KIR2DL5AQ8N109 375 aa15.97■□□□□ 0.15
LYSMD2-201ENST00000267838 ZANQ9Y493 2812 aa15.96■□□□□ 0.15
LYSMD2-201ENST00000267838 SNRPCP09234 159 aaKnown RBP15.96■□□□□ 0.15
LYSMD2-201ENST00000267838 NBEAP1P0C6P0 100 aa15.96■□□□□ 0.15
LYSMD2-201ENST00000267838 OR8I2Q8N0Y5 310 aa15.96■□□□□ 0.15
LYSMD2-201ENST00000267838 TEX29Q8N6K0 151 aa15.96■□□□□ 0.15
LYSMD2-201ENST00000267838 BLNKQ8WV28 456 aa15.96■□□□□ 0.15
LYSMD2-201ENST00000267838 ZNF580Q9UK33 172 aa15.96■□□□□ 0.15
LYSMD2-201ENST00000267838 GRIFINA4D1Z8 144 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 A0A1B0GUS0 222 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 HOXA3O43365 443 aaPredicted RBP15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 NUPR1O60356 82 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 OR5I1Q13606 314 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 ZNF329Q86UD4 541 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 BAGE3Q86Y29 109 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 BAGE2Q86Y30 109 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 ZNF414Q96IQ9 312 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 IGF2BP2-AS1Q96M15 143 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 ATP6V0BQ99437 205 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 TP53TG3Q9ULZ0 132 aa15.95■□□□□ 0.14
LYSMD2-201ENST00000267838 BPIFA4PQ86YQ2 179 aa15.94■□□□□ 0.14
LYSMD2-201ENST00000267838 GNB4Q9HAV0 340 aa15.94■□□□□ 0.14
LYSMD2-201ENST00000267838 ITPR3Q14573 2671 aa15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 ZNF705FA8MVS1 300 aaPredicted RBP15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 SERF1AO75920 110 aa15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 ZNF705DP0CH99 300 aaPredicted RBP15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 ZNF705BP0CI00 300 aaPredicted RBP15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 HIST1H1EP10412 219 aaKnown RBP15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 MYCNOSP40205 109 aa15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 CFHR3Q02985 330 aa15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 OR10J3Q5JRS4 329 aa15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 IL17RELQ6ZVW7 336 aa15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 CDC42EP3Q9UKI2 254 aa15.93■□□□□ 0.14
LYSMD2-201ENST00000267838 IGHV3-35A0A0C4DH35 117 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 IGLV1-40P01703 118 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 IBA57Q5T440 356 aaKnown RBP15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 MRPL52Q86TS9 123 aaKnown RBP15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 USMG5Q96IX5 58 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 RABAC1Q9UI14 185 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 CCDC168Q8NDH2 2452 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 BMPR1BO00238 502 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 HLA-DQA1P01909 254 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 PF4V1P10720 104 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 TMEM95Q3KNT9 176 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 TOMM20LQ6UXN7 152 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 ZNF586Q9NXT0 402 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 NAT8BQ9UHF3 227 aa15.92■□□□□ 0.14
LYSMD2-201ENST00000267838 SMIM27A0A1W2PRY6 76 aa15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 H3BTX0 84 aa15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 IGLV2-8P01709 118 aa15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 LINC00310P59036 64 aa15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 KRTAP1-1Q07627 177 aa15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 OR4F17Q8NGA8 305 aa15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 SAMD10Q9BYL1 202 aa15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 RNASE7Q9H1E1 156 aaKnown RBP15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 ZFAND3Q9H8U3 227 aa15.91■□□□□ 0.14
LYSMD2-201ENST00000267838 RASL11AQ6T310 242 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 TEX43Q6ZNM6 134 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 TMEM136Q6ZRR5 245 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 Q6ZWC4 215 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 SIGLECL1Q8N7X8 197 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 KLK15Q9H2R5 256 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 RNF24Q9Y225 148 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 PGPA6NDG6 321 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 MRPS12O15235 138 aaKnown RBP15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 CD5LO43866 347 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 IGLC2P0DOY2 106 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 MGST1P10620 155 aaKnown RBP15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 S100A7P31151 101 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 RELQ04864 619 aaPredicted RBP15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 FAM231DQ6ZW35 169 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 PRSS22Q9GZN4 317 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 Q9H3A6 140 aa15.9■□□□□ 0.14
LYSMD2-201ENST00000267838 TEX15Q9BXT5 2789 aa15.89■□□□□ 0.13
LYSMD2-201ENST00000267838 IGHV3OR16-8A0A075B7F1 116 aa15.89■□□□□ 0.13
LYSMD2-201ENST00000267838 IZUMO1RA6ND01 250 aa15.89■□□□□ 0.13
LYSMD2-201ENST00000267838 SLC25A5P05141 298 aaKnown RBP15.89■□□□□ 0.13
LYSMD2-201ENST00000267838 TMEM183BQ1AE95 376 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms