RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 DDB2Q92466 427 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 SIGLEC8Q9NYZ4 499 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 H3BTX0 84 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 TNFRSF6BO95407 300 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 BRI3O95415 125 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 EFNB3Q15768 340 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 C3orf36Q3SXR2 165 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 Q6AWC8 147 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 ONECUT1Q9UBC0 465 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 HELZ2Q9BYK8 2649 aaKnown RBP6.83□□□□□ -1.32
LDB3-201ENST00000263066 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 SPINT2O43291 252 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 REG1BP48304 166 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 PRB3Q04118 309 aaPredicted RBP6.83□□□□□ -1.32
LDB3-201ENST00000263066 FOXC2Q99958 501 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 TEP1Q99973 2627 aaKnown RBP6.83□□□□□ -1.32
LDB3-201ENST00000263066 NBEAQ8NFP9 2946 aa6.83□□□□□ -1.32
LDB3-201ENST00000263066 EML6Q6ZMW3 1958 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 CHD6Q8TD26 2715 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 NPIPB6E9PJ23 425 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 GCSAMQ8N6F7 178 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 TMEM54Q969K7 222 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 WDR83OSQ9Y284 106 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 C12orf74Q32Q52 190 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 LYPD6Q86Y78 171 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 RASL11BQ9BPW5 248 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 SMIM9A6NGZ8 99 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 F5H768 121 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 LY6HO94772 140 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 CLPSP04118 112 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 PRB4P10163 310 aaPredicted RBP6.82□□□□□ -1.32
LDB3-201ENST00000263066 HSPE1P61604 102 aaKnown RBP6.82□□□□□ -1.32
LDB3-201ENST00000263066 DRAM1Q8N682 238 aa6.82□□□□□ -1.32
LDB3-201ENST00000263066 CSDC2Q9Y534 153 aaKnown RBP6.82□□□□□ -1.32
LDB3-201ENST00000263066 TRAV2A0A0B4J234 112 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 CKS2P33552 79 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 ZNF146Q15072 292 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 ZC2HC1BQ5TFG8 222 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 FNDC7Q5VTL7 733 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 SRSF12Q8WXF0 261 aaKnown RBP6.81□□□□□ -1.32
LDB3-201ENST00000263066 CSMD2Q7Z408 3487 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 TCRBV4S1A1TA0A5B7 111 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 NCR2O95944 276 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 ZNF56Q15929 161 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 HIST2H2BCQ6DN03 193 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 PDPNQ86YL7 162 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 LYZL4Q96KX0 146 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 C11orf1Q9H5F2 150 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 LOC107984640A0A0U1RRK4 108 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 PGPA6NDG6 321 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 ORM2P19652 201 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 HERVK_113P61574 105 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 ZNF718Q3SXZ3 478 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 VKORC1L1Q8N0U8 176 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 ZNF645Q8N7E2 425 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 TMEM126AQ9H061 195 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 SPANXA1Q9NS26 97 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 LY96Q9Y6Y9 160 aa6.81□□□□□ -1.32
LDB3-201ENST00000263066 TRAV25A0A0B4J276 109 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 IGKV1-12A0A0C4DH73 117 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 LINC01549A6NIU2 74 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 FOXI3A8MTJ6 420 aaPredicted RBP6.8□□□□□ -1.32
LDB3-201ENST00000263066 C9JAW5 83 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 LYNX1G3V0Z9 82 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 NDUFA3O95167 84 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 LTAP01374 205 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 IGKV1D-12P01611 117 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 LYNX1P0DP58 116 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 ZNF441Q8N8Z8 693 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 OR10J6PQ8NGY7 276 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 RPP21Q9H633 154 aaKnown RBP6.8□□□□□ -1.32
LDB3-201ENST00000263066 IDI2-AS1Q9NZ38 188 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 SMIM27A0A1W2PRY6 76 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 J3KT08 172 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 IFI27P40305 119 aaPredicted RBP6.8□□□□□ -1.32
LDB3-201ENST00000263066 FOXE3Q13461 319 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 LINC01545Q5VT33 79 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 RBPMS2Q6ZRY4 209 aaKnown RBP6.8□□□□□ -1.32
LDB3-201ENST00000263066 ZNF826PQ6ZT77 177 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 CEND1Q8N111 149 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 CIARTQ8N365 385 aaPredicted RBP6.8□□□□□ -1.32
LDB3-201ENST00000263066 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 PAXXQ9BUH6 204 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 ZNF747Q9BV97 191 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 CD3EP07766 207 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 FAM201AQ5SY85 155 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 TREML4Q6UXN2 200 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 PRNTQ86SH4 94 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 DCHS2Q6V1P9 2916 aa6.8□□□□□ -1.32
LDB3-201ENST00000263066 MOSP00540 346 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 HBDP02042 147 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 RRN3P1Q2M238 152 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 RTL8AQ9BWD3 113 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 TM2D2Q9BX73 214 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 PKIGQ9Y2B9 76 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 COL27A1Q8IZC6 1860 aaPredicted RBP6.79□□□□□ -1.32
LDB3-201ENST00000263066 IGHV3OR15-7A0A075B7D8 119 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 PEX7O00628 323 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms