RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Fam241aQ9CZL2 131 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm9817Q9D2M0 144 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Tmem170aQ9D342 144 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Mdp1Q9D967 164 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr878Q9EQA9 314 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Herpud1Q9JJK5 391 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Abca4O35600 2310 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 KalrnA2CG49 2964 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr1118A0A0J9YUE7 307 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm14408E9Q6B9 136 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Pwwp2bE9Q9M8 600 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm21834J3QN05 151 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm10251J3QPM5 127 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 H3f3cP02301 136 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Zfp36l1P23950 338 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Icam2P35330 277 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Timp3P39876 211 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 FmodP50608 376 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Otx2P80206 289 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Jsrp1Q3MI48 332 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 EcscrQ3TZW0 214 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm6899Q3USS0 134 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Wfdc9Q3UW41 83 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Rtl6Q505G4 243 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr138Q7TRI7 312 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Zfp729bQ80VN4 1045 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Zdhhc25Q810M4 279 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Vmn1r225Q8R2A5 298 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Klk10Q99M20 278 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm2916Q9D9B9 127 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Abhd5Q9DBL9 351 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Hils1Q9QYL0 170 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Chst4Q9R1I1 388 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Pdcd1lg2Q9WUL5 247 aa9.13□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm28372A0A087WNV0 220 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm20219A0A1B0GRQ3 87 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Fgf5P15656 264 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Cks2P56390 79 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Tcl1b1P56840 116 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 PkibQ04758 92 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Tle3Q08122 772 aaKnown RBP9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm21943Q5FWD5 227 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Taar5Q5QD14 337 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Klk1b21Q61759 261 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Foxb1Q64732 325 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Zfp85Q7TMC9 473 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gtf2h5Q8K2X8 71 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Myct1Q8R411 188 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Map1lc3bQ9CQV6 125 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Msmo1Q9CRA4 293 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Dtwd2Q9D0U1 298 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Arid1bE9Q4N7 2244 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 AesP63002 197 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gpbar1Q80SS6 329 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 TncQ80YX1 2110 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Nit1Q8VDK1 323 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Bcdin3dQ91YP1 285 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Q9CX63 252 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Mbnl1Q9JKP5 341 aaKnown RBP9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 NmuQ9QXK8 174 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Rab9aQ9R0M6 201 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Supt4h1bQ9Z199 117 aa9.12□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 TprF6ZDS4 2431 aaKnown RBP9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Kcns2O35174 477 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Foxa2P35583 459 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Tnfsf10P50592 291 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Nmes1Q810Q5 83 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Srsf7Q8BL97 267 aaKnown RBP9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 BC106179Q8C9L1 186 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr494Q8VG07 314 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Kcnmb2Q9CZM9 235 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Usf3B2RUQ2 2221 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Pax5Q02650 391 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gpr183Q3U6B2 357 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 AbraclQ4KML4 81 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Tgfbr1Q64729 503 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Cphx2Q8BX39 182 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Prodh2Q8VCZ9 456 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr509Q8VF20 321 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr980Q8VH08 310 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Tmem126bQ9D1R1 230 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Tspan13Q9D8C2 204 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Ctag2Q9D9S4 219 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Gm17333C6EQI3 125 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr1116E9PXB8 307 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr224M9MMJ7 314 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 CrpP14847 225 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 CortP56469 109 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Coq2Q66JT7 374 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Slc25a29Q8BL03 306 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Scgb2b26Q8JZX1 112 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Olfr57Q8VGU7 319 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Mpv17lQ99MS3 194 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Tmem54Q9D7S1 219 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Cbln3Q9JHG0 197 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Vax2Q9WTP9 292 aa9.11□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Myo9bQ9QY06 2114 aa9.1□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Muc5acE9QAQ8 3455 aa9.1□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 Onecut1O08755 465 aa9.1□□□□□ -0.95
Prpf40b-202ENSMUST00000118287 P01680 129 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms