RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Scgb1b27Q91WB5 92 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 SmagpQ99KC7 97 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Zfp292Q9Z2U2 2698 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Dcaf10A2AKB9 566 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Gm14288E9Q9W0 88 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Gm20532G3UXR8 106 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Atpif1O35143 106 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Bcl2P10417 236 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 PpyP10601 100 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Id3P41133 119 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Col9a1Q05722 921 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Zfp970Q08BU3 522 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 SnrpcQ62241 159 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Rph3alQ768S4 302 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 EtdQ80SW5 59 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Pth2Q91W27 100 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Rnps1Q99M28 305 aaKnown RBP9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Ms4a4cQ9D3F6 226 aa9.72□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Gm28845A0A087WR76 214 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Gm14412A2ARR7 526 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Nkx2-8O70584 235 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Iglc2P01844 104 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Tpt1P63028 172 aaKnown RBP9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Mpc1P63030 109 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Spink11Q09TK7 88 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Cyb561Q60720 250 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 HrasQ61411 189 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Arl11Q6P3A9 176 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Olfr94Q6UAH0 386 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Ovch2Q7M761 609 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Olfr1269Q8VEZ2 309 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Olfr1350Q8VF34 308 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Olfr1370Q8VFG4 316 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Mrpl3Q99N95 348 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Gm35060A0A140LIV7 231 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Ctxnd1A0A1B0GST9 59 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Timp1P12032 205 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Rbp2Q08652 134 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Zglp1Q1WG82 266 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Ifna16Q810G1 189 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Smim4Q8C1Q6 80 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Pcgf1Q8R023 259 aaKnown RBP9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Olfr484Q8VFD3 321 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Olfr1445Q8VFW9 314 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Vmn1r54Q9EPB8 315 aa9.71□□□□□ -0.85
Col9a1-202ENSMUST00000088349 Pcnx2Q5DU28 2122 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Igkv13-84A0A140T8N3 115 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Cpsf4lE9Q2N0 280 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Vmn1r113G3UWI8 307 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Ifna6P07350 189 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Pfn1P62962 140 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Sf3a2Q62203 475 aaKnown RBP9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Onecut2Q6XBJ3 505 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Olfr335-psQ7TRY6 312 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Lhfpl2Q8BGA2 222 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Psg16Q8K0U8 395 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Olfr355Q8VFP6 310 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Olfr344Q8VFP9 309 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 H1fooQ8VIK3 304 aa9.71□□□□□ -0.86
Col9a1-202ENSMUST00000088349 PkdrejQ9Z0T6 2126 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 SetxA2AKX3 2646 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Gm10778A0A087WNP5 499 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Aqp7O54794 303 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Fabp4P04117 132 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Cdkn2aQ64364 169 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Aadacl4Q8BM81 407 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Klre1Q8CJC7 226 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Tmem147Q9CQG6 224 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Herpud1Q9JJK5 391 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Olfr92L7N475 312 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Efna2P52801 209 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 SspnQ62147 216 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Vkorc1l1Q6TEK5 176 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Znf474Q6V5K9 347 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Olfr917Q7TRC3 309 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Q80VP5 184 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Tmprss3Q8K1T0 453 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Vmn1r26Q8R2D7 339 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Olfr1413Q8VGU3 323 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 B3gnt9Q8VI16 399 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Dctn5Q9QZB9 182 aa9.7□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Ighv5-2A0A0A6YVX8 117 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Fcgr4A0A0B4J1G0 249 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Zfp971A2BFG8 470 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Olfr221B2RVX8 311 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Gm21719J3KMI9 230 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Gm20767O70517 169 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Jmjd7P0C872 316 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Fgf7P36363 194 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 CxadrP97792 365 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Pax5Q02650 391 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Crebl2Q32M00 123 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 CenptQ3TJM4 515 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Sp9Q64HY3 484 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 5930422O12RikQ8C4Y4 123 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Cdc34Q8CFI2 235 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Sfxn4Q925N1 313 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Opn3Q9WUK7 400 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Gpr132Q9Z282 382 aa9.69□□□□□ -0.86
Col9a1-202ENSMUST00000088349 Tln2Q71LX4 2375 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 220 ms