RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Ceacam9Q78T27 234 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Fbxo46Q8BG80 603 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr593Q8VF28 327 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Lime1Q9EQR5 269 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Gm3045A0A1D5RMA1 209 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 MENTQ569E4 350 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Pxt1Q8K459 51 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tmem97Q8VD00 176 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Trav6d-5A0A075B6B9 112 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr1369-ps1A0A140T8K7 317 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Igkv6-20A0A140T8P2 115 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Fbln7Q501P1 440 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr263Q7TQT8 317 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Acp1Q9D358 158 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Rab37Q9JKM7 223 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Trav16A0A075B653 116 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tmem108Q8BHE4 574 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Klk14Q8CGR5 250 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Anapc13Q8R034 74 aa12.63□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Trav4-2A0A075B638 110 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Vsig10l2A0A140LHF2 776 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Samt3A2ARK7 233 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Vmn1r224E9PWK2 298 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 H2al1nQ497L1 109 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tmem158Q6F5E0 286 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Plcxd2B2RXA1 340 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Meox1P32442 253 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 PilraQ2YFS3 302 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 B020031M17RikQ3UT11 173 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Taar4Q5QD15 347 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 2810408A11RikQ6NSU2 435 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Scgb2b24Q7M747 112 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Duxbl2Q7TNE6 350 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Myct1Q8R411 188 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Defb7Q91V70 71 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Atxn7l1Q9CZ05 146 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Igkv4-86A0A0G2JGE7 114 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Trav12-1A0N8R1 115 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 SelenotP62342 195 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr153Q7TR48 307 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Nrn1Q8CFV4 142 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr1184Q8VG86 311 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tstd1E9PY03 133 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Vmn1r60G3UY47 300 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Epha8O09127 1004 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Rspo2Q8BFU0 243 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Spcs1Q9D958 161 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Fscn3Q9QXW4 498 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Mixl1Q9WUI0 231 aa12.62□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tex54G3UW99 86 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Dlx1Q64317 255 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 SowahbQ8BZW2 760 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Prr23a3Q9CWP9 254 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tnfsf14Q9QYH9 239 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Nhlrc4Q3UP44 136 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Fam117aQ7TNF9 451 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Vmn1r179Q8R2B4 323 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Trbv26A0A0B4J1P5 115 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 A0A1Y7VMQ4 148 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Rnf39A2RT81 352 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr1185-ps1F6XP16 303 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Lrrc52Q5M8M9 314 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Saxo2Q8BQB6 394 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Rnf151Q9CQ29 239 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Gm28729A0A1B0GSW2 409 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Ssc4dA1L0T3 586 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Gm21732J3QM79 361 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Gm21921J3QNB5 361 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Rpl30P62889 115 aaKnown RBP12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Bex6Q3TZW7 114 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr1362Q5SZZ8 308 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Negr1Q80Z24 348 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Sox21Q811W0 276 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Aqp6Q8C4A0 293 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Klk15Q8CGR4 254 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr127Q8VF25 323 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr490Q8VFD2 314 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Tmem126aQ9D8Y1 196 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 PigpQ9JHG1 132 aa12.61□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 CroccQ8CJ40 2009 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 BtlaQ7TSA3 306 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Ppp1caP62137 330 aaKnown RBP12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Hist2h2beQ64524 126 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr358Q7TRY5 330 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Gucd1Q8BZI6 239 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Ociad1Q9CRD0 247 aaKnown RBP12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 P01806 116 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 P18533 117 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Wnt5aP22725 380 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 SeboxP70368 190 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 HpxQ91X72 460 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Psme4Q5SSW2 1843 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr178E9Q9T3 319 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Gng4P50153 75 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Cd99l2Q8BIF0 237 aa12.6□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 OdamA1E960 273 aa12.59□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Olfr1016A2ASV2 309 aa12.59□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Vstm2lQ6PDS0 220 aa12.59□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Cd200r5Q8BTP3 270 aa12.59□□□□□ -0.39
Pcdha1-201ENSMUST00000070797 Sfxn3Q91V61 321 aa12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms