RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Lhx2Q9Z0S2 406 aa8.21□□□□□ -1.09
Pcdh1-201ENSMUST00000057185 Mpv17P19258 176 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ifna13Q80SU4 189 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ifna16Q810G1 189 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pld4Q8BG07 503 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Fam103a1Q9CQY2 119 aaKnown RBP8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Adamts20P59511 1906 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ighv1-76A0A0G2JFE9 117 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tarm1B6A8R8 288 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm4884E9PVP9 694 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Mtco2P00405 227 aaKnown RBP8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Lyz1P17897 148 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Rbp4Q00724 201 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Col9a1Q05722 921 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Taar5Q5QD14 337 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Smim7Q5RKS2 75 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Syt13Q9EQT6 426 aa8.21□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm4565A0A140LJ87 301 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm9964E9Q9S5 144 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm20532G3UXR8 106 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm6176J3QK59 301 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm8653K9J7G2 307 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Vmn1r117L7N2C9 307 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Alox12bO70582 701 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 P18529 117 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 PpoxP51175 477 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm4567Q3UTA8 301 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Sf3a2Q62203 475 aaKnown RBP8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Prss33Q80WM7 277 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pcgf1Q8R023 259 aaKnown RBP8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Vmn1r237Q8R296 289 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Rhbdd2Q8VEK2 361 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tmem100Q9CQG9 134 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Polr3kQ9CQZ7 108 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Fbxo25Q9D2Y6 357 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ms4a4cQ9D3F6 226 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm19410A0A140LJC7 2098 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Med12A2AGH6 2190 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 AU041133A0A0J9YVH3 498 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr466E9Q2B9 308 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1053L7MU59 313 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 P01680 129 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pax1P09084 446 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 PtcraP0C6B2 199 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Zfp72Q0VFY0 435 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hhipl1Q14DK5 791 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 PtafrQ62035 341 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tmem106bQ80X71 275 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 AdtrpQ8C138 230 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Psg16Q8K0U8 395 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr507Q8VG13 316 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Arl13aQ9D416 372 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Iglv3A0A0B4J1K5 122 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ighv1-67A0A0G2JFN9 117 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1274-psA0A1L1SQ02 309 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1191-ps1A0A1L1STD5 311 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Fcrl6A1YIY0 268 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gstp1P19157 210 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ctdsp1P58466 261 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Foxf1Q61080 378 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gpbar1Q80SS6 329 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 NracQ8BNX7 165 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Klk13Q8CGR6 276 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ythdf2Q91YT7 579 aaKnown RBP8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 DnlzQ9D113 177 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Spaca3Q9D9X8 221 aa8.2□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 AsmtD3KU66 387 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Colca2F8VPY8 239 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Syngr2O55101 224 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 P01657 111 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Timp1P12032 205 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tmem52bQ0VBF2 186 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 BC147527Q3V185 167 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tob1Q61471 362 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Dirc2Q8BFQ6 478 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Stac2Q8R1B0 408 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr223Q8VF69 319 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ms4a6cQ99N08 217 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Necap1Q9CR95 275 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Atg101Q9D8Z6 218 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ctag2Q9D9S4 219 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr894Q9EQB2 313 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hsd17b6Q9R092 317 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Fbln5Q9WVH9 448 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 PkdrejQ9Z0T6 2126 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Igkv13-85A0A075B666 115 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Igkv4-50A0A0B4J1J0 117 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tex54G3UW99 86 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Sftpa1P35242 248 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Rpl23P62830 140 aaKnown RBP8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Rpl30P62889 115 aaKnown RBP8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pax6P63015 422 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tmem184aQ3UFJ6 425 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Vdac1Q60932 296 aaKnown RBP8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 HrasQ61411 189 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Zfp677Q6PEP4 634 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1474Q7TQQ8 314 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hist3h2bbQ8CGP0 126 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1350Q8VF34 308 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hist3h2baQ9D2U9 126 aa8.19□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms