RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TSKUQ8WUA8 353 aa13.29□□□□□ -0.28
PHGDH-229ENST00000641891 HIGD1CA8MV81 97 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 CD33P20138 364 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 Q0VG73 95 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 SLAQ13239 276 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 PRNTQ86SH4 94 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 CIARTQ8N365 385 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-229ENST00000641891 SMIM12Q96EX1 92 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 ZNF331Q9NQX6 463 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-229ENST00000641891 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 TRAV30A0A087WSZ9 112 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 HLA-DQA1P01909 254 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 SIGLEC15Q6ZMC9 328 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 ZNF48Q96MX3 618 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-229ENST00000641891 MS4A10Q96PG2 267 aa13.28□□□□□ -0.28
PHGDH-229ENST00000641891 RPP21Q9H633 154 aaKnown RBP13.28□□□□□ -0.28
PHGDH-229ENST00000641891 VPS13CQ709C8 3753 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 ZFHX3Q15911 3703 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 C19orf71A6NCJ1 209 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 NPFFO15130 113 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 APCSP02743 223 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 SRIP30626 198 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 PKIAP61925 76 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 ECSCRQ19T08 205 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 COX19Q49B96 90 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 FBXL7Q9UJT9 491 aa13.27□□□□□ -0.28
PHGDH-229ENST00000641891 ZNF414Q96IQ9 312 aa13.27□□□□□ -0.29
PHGDH-229ENST00000641891 RCHY1Q96PM5 261 aa13.27□□□□□ -0.29
PHGDH-229ENST00000641891 CHRDL1Q9BU40 450 aa13.27□□□□□ -0.29
PHGDH-229ENST00000641891 PRSS22Q9GZN4 317 aa13.27□□□□□ -0.29
PHGDH-229ENST00000641891 C1RLQ9NZP8 487 aa13.27□□□□□ -0.29
PHGDH-229ENST00000641891 IGHV3OR16-8A0A075B7F1 116 aa13.26□□□□□ -0.29
PHGDH-229ENST00000641891 CENPVL3A0A0U1RRI6 287 aa13.26□□□□□ -0.29
PHGDH-229ENST00000641891 LINC01548A6NM66 108 aa13.26□□□□□ -0.29
PHGDH-229ENST00000641891 ATP6V0E1O15342 81 aa13.26□□□□□ -0.29
PHGDH-229ENST00000641891 ESDP10768 282 aa13.26□□□□□ -0.29
PHGDH-229ENST00000641891 Q6ZWC4 215 aa13.26□□□□□ -0.29
PHGDH-229ENST00000641891 ZNF664Q8N3J9 261 aa13.26□□□□□ -0.29
PHGDH-229ENST00000641891 WIPF2Q8TF74 440 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-229ENST00000641891 THYN1Q9P016 225 aa13.26□□□□□ -0.29
PHGDH-229ENST00000641891 IGHV3-35A0A0C4DH35 117 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 SCGB1D1O95968 90 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 P01737 135 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 BRS3P32247 399 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 TPPP2P59282 170 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 FAM209BQ5JX69 171 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 UNQ5815/PRO19632Q6UWF5 114 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 GTSF1Q8WW33 167 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 TMUB1Q9BVT8 246 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 SSBP4Q9BWG4 385 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-229ENST00000641891 ZNF492Q9P255 531 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 M0R3E3 92 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 CTSGP08311 255 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 CAMPP49913 170 aa13.25□□□□□ -0.29
PHGDH-229ENST00000641891 PIEZO1Q92508 2521 aa13.24□□□□□ -0.29
PHGDH-229ENST00000641891 IGHV4-61A0A0C4DH41 118 aa13.24□□□□□ -0.29
PHGDH-229ENST00000641891 RNF224P0DH78 156 aa13.24□□□□□ -0.29
PHGDH-229ENST00000641891 ZNF785A8K8V0 405 aa13.24□□□□□ -0.29
PHGDH-229ENST00000641891 TSTD3H0UI37 97 aa13.24□□□□□ -0.29
PHGDH-229ENST00000641891 IQCJQ1A5X6 159 aa13.24□□□□□ -0.29
PHGDH-229ENST00000641891 NOL4LQ96MY1 436 aaPredicted RBP13.24□□□□□ -0.29
PHGDH-229ENST00000641891 CCL19Q99731 98 aa13.24□□□□□ -0.29
PHGDH-229ENST00000641891 ABCA2Q9BZC7 2435 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 G3V318 75 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 ZNF253O75346 499 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 PAFAH1B2P68402 229 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 OR10J3Q5JRS4 329 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 RASL11AQ6T310 242 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 TMEM219Q86XT9 240 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 FAM110DQ8TAY7 271 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-229ENST00000641891 DAZAP1Q96EP5 407 aaKnown RBP13.23□□□□□ -0.29
PHGDH-229ENST00000641891 PGLYRP4Q96LB8 373 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 SAMD10Q9BYL1 202 aa13.23□□□□□ -0.29
PHGDH-229ENST00000641891 A0A1B0GXF2 115 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 DDTP30046 118 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 C15orf32Q32M92 178 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 ZC2HC1AQ96GY0 325 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 NAGKQ9UJ70 344 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 RNF24Q9Y225 148 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 RNF114Q9Y508 228 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 CACNA1AO00555 2505 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 COL12A1Q99715 3063 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 DIRC3C9JPN6 131 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 GPR183P32249 361 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 TMEM75Q8N9X5 138 aa13.22□□□□□ -0.29
PHGDH-229ENST00000641891 A8MWL6 223 aa13.21□□□□□ -0.29
PHGDH-229ENST00000641891 COL8A1P27658 744 aa13.21□□□□□ -0.29
PHGDH-229ENST00000641891 RHOGP84095 191 aa13.21□□□□□ -0.29
PHGDH-229ENST00000641891 PAX8Q06710 450 aa13.21□□□□□ -0.29
PHGDH-229ENST00000641891 BRD3OSQ6XYD6 125 aa13.21□□□□□ -0.29
PHGDH-229ENST00000641891 LYPD1Q8N2G4 141 aa13.21□□□□□ -0.29
PHGDH-229ENST00000641891 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
PHGDH-229ENST00000641891 CFAP46Q8IYW2 2715 aa13.21□□□□□ -0.29
PHGDH-229ENST00000641891 A0A1W2PS18 150 aa13.21□□□□□ -0.3
PHGDH-229ENST00000641891 NPIPB6E9PJ23 425 aa13.21□□□□□ -0.3
PHGDH-229ENST00000641891 DEFA6Q01524 100 aa13.21□□□□□ -0.3
PHGDH-229ENST00000641891 PSG3Q16557 428 aa13.21□□□□□ -0.3
PHGDH-229ENST00000641891 CT83Q5H943 113 aa13.21□□□□□ -0.3
PHGDH-229ENST00000641891 OR2D3Q8NGH3 330 aa13.21□□□□□ -0.3
PHGDH-229ENST00000641891 KCNS1Q96KK3 526 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms