RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 RPL39P5Q59GN2 51 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 PCP2Q8IVA1 136 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 ZNRF1Q8ND25 227 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 TMEM160Q9NX00 188 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 RIF1Q5UIP0 2472 aaKnown RBP4.63□□□□□ -1.67
SCARB2-218ENST00000639715 GPR179Q6PRD1 2367 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 IGKV1-6A0A0C4DH72 117 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 IGLL5B9A064 214 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 CD59P13987 128 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 RPL27AP46776 148 aaKnown RBP4.63□□□□□ -1.67
SCARB2-218ENST00000639715 FXYD2P54710 66 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 C1RLQ9NZP8 487 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 SPRR3Q9UBC9 169 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 DOCK7Q96N67 2140 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 TRAV8-4A0A0B4J246 113 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 K7EMI3 77 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 VKORC1L1Q8N0U8 176 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 C9orf106Q8NAJ2 232 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 ABHD17AQ96GS6 310 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 TMEM131Q92545 1883 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 NCOA6Q14686 2063 aaPredicted RBP4.63□□□□□ -1.67
SCARB2-218ENST00000639715 NOTCH2Q04721 2471 aa4.63□□□□□ -1.67
SCARB2-218ENST00000639715 TRAV25A0A0B4J276 109 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 SMIM9A6NGZ8 99 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 PSPNO60542 156 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 RPL7P18124 248 aaKnown RBP4.62□□□□□ -1.67
SCARB2-218ENST00000639715 TMEM155Q4W5P6 130 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 PEAR1Q5VY43 1037 aaPredicted RBP4.62□□□□□ -1.67
SCARB2-218ENST00000639715 OR10J6PQ8NGY7 276 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 OR9G1Q8NH87 305 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 IFI27L2Q9H2X8 130 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 C15orf61A6NNL5 157 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 SRRM5B3KS81 715 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 C10orf142B7Z368 130 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.62□□□□□ -1.67
SCARB2-218ENST00000639715 J3KT08 172 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 OR2J3O76001 311 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 LYZP61626 148 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 DUX4L9Q6RFH8 374 aaPredicted RBP4.62□□□□□ -1.67
SCARB2-218ENST00000639715 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 SNRNP40Q96DI7 357 aaKnown RBP4.62□□□□□ -1.67
SCARB2-218ENST00000639715 RASL11BQ9BPW5 248 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 DCTN5Q9BTE1 182 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 EPDR1Q9UM22 224 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 FXYD7P58549 80 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 FOXF2Q12947 444 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 KRTAP27-1Q3LI81 207 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 PSMG4Q5JS54 123 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 IGF2-ASQ6U949 168 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 C20orf204Q6ZNR8 217 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 TMEM105Q8N8V8 129 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 GTSF1Q8WW33 167 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 KIR2DL4Q99706 377 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 ONECUT1Q9UBC0 465 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 TRAV2A0A0B4J234 112 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 F5H768 121 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 COX7A1P24310 79 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 Q6AWC8 147 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 MIR17HGQ75NE6 70 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 GTSCR1Q86UQ5 136 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 HIGD1AQ9Y241 93 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 LINC00312Q9Y6C7 94 aa4.62□□□□□ -1.67
SCARB2-218ENST00000639715 UPK2O00526 184 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 IGHG3P01860 377 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 KLF5Q13887 457 aaPredicted RBP4.61□□□□□ -1.67
SCARB2-218ENST00000639715 C12orf74Q32Q52 190 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 ASPHD1Q5U4P2 390 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 C2orf91Q6ZV80 131 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 LEAP2Q969E1 77 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 SCNM1Q9BWG6 230 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 CSDC2Q9Y534 153 aaKnown RBP4.61□□□□□ -1.67
SCARB2-218ENST00000639715 TNFRSF6BO95407 300 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 CD40P25942 277 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 ATP5L2Q7Z4Y8 100 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 C15orf53Q8NAA6 179 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 HS3ST6Q96QI5 342 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 C11orf1Q9H5F2 150 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 EDA2RQ9HAV5 297 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 IGHV1-18A0A0C4DH31 117 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 LINC01545Q5VT33 79 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 CREBBPQ92793 2442 aa4.61□□□□□ -1.67
SCARB2-218ENST00000639715 SMIM27A0A1W2PRY6 76 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 PGPA6NDG6 321 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 NPIPB6E9PJ23 425 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 TWIST1Q15672 202 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 EFNB3Q15768 340 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 RRN3P1Q2M238 152 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 GAGE2AQ6NT46 116 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 TREML4Q6UXN2 200 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 ODF3L1Q8IXM7 274 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 COQ2Q96H96 371 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 FOXC2Q99958 501 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 PCDH15Q96QU1 1955 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 TCRBV4S1A1TA0A5B7 111 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 C9JAW5 83 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 IGKV3-15P01624 115 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 FAM106CPP0CH98 169 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 SAA2P0DJI9 122 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 CKS2P33552 79 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 PRCDQ00LT1 54 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms