RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 COL12A1Q99715 3063 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 MRPS12O15235 138 aaKnown RBP16.85■□□□□ 0.29
CLN6-224ENST00000638076 HLA-DQA1P01909 254 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 LINC00310P59036 64 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 CCL19Q99731 98 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 TMUB1Q9BVT8 246 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 FBXL7Q9UJT9 491 aa16.85■□□□□ 0.29
CLN6-224ENST00000638076 Q86TA4 180 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 NEU1Q99519 415 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 HIGD1CA8MV81 97 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 F2Z2F3 143 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 SERF1AO75920 110 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 Q0VG73 95 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 ECSCRQ19T08 205 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 SIGLEC15Q6ZMC9 328 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 S100A7AQ86SG5 101 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 BAGE3Q86Y29 109 aa16.84■□□□□ 0.29
CLN6-224ENST00000638076 POLR3KQ9Y2Y1 108 aaPredicted RBP16.84■□□□□ 0.29
CLN6-224ENST00000638076 VPS13CQ709C8 3753 aa16.83■□□□□ 0.29
CLN6-224ENST00000638076 IGLV2-11P01706 119 aa16.83■□□□□ 0.28
CLN6-224ENST00000638076 UNQ5815/PRO19632Q6UWF5 114 aa16.83■□□□□ 0.28
CLN6-224ENST00000638076 ATP6V0E1O15342 81 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 ZNF414Q96IQ9 312 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 PIMREGQ9BSJ6 248 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 PRSS22Q9GZN4 317 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 RPP21Q9H633 154 aaKnown RBP16.82■□□□□ 0.28
CLN6-224ENST00000638076 CFAP46Q8IYW2 2715 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 C19orf71A6NCJ1 209 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 CTSGP08311 255 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 PRNTQ86SH4 94 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 LYPD1Q8N2G4 141 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 FAM110DQ8TAY7 271 aaPredicted RBP16.82■□□□□ 0.28
CLN6-224ENST00000638076 WIPF2Q8TF74 440 aaPredicted RBP16.82■□□□□ 0.28
CLN6-224ENST00000638076 GNB4Q9HAV0 340 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 ZNF492Q9P255 531 aa16.82■□□□□ 0.28
CLN6-224ENST00000638076 IGHV4-61A0A0C4DH41 118 aa16.81■□□□□ 0.28
CLN6-224ENST00000638076 P01737 135 aa16.81■□□□□ 0.28
CLN6-224ENST00000638076 PAX8Q06710 450 aa16.81■□□□□ 0.28
CLN6-224ENST00000638076 C9orf152Q5JTZ5 239 aa16.81■□□□□ 0.28
CLN6-224ENST00000638076 RASL11AQ6T310 242 aa16.81■□□□□ 0.28
CLN6-224ENST00000638076 IGHV3OR16-10A0A075B7F0 116 aa16.81■□□□□ 0.28
CLN6-224ENST00000638076 BMPR1BO00238 502 aa16.81■□□□□ 0.28
CLN6-224ENST00000638076 ESDP10768 282 aa16.81■□□□□ 0.28
CLN6-224ENST00000638076 CIARTQ8N365 385 aaPredicted RBP16.81■□□□□ 0.28
CLN6-224ENST00000638076 DAZAP1Q96EP5 407 aaKnown RBP16.81■□□□□ 0.28
CLN6-224ENST00000638076 SH2D7A6NKC9 451 aaPredicted RBP16.8■□□□□ 0.28
CLN6-224ENST00000638076 SCGB2A1O75556 95 aa16.8■□□□□ 0.28
CLN6-224ENST00000638076 APCSP02743 223 aa16.8■□□□□ 0.28
CLN6-224ENST00000638076 PRB4P10163 310 aaPredicted RBP16.8■□□□□ 0.28
CLN6-224ENST00000638076 SPTAN1Q13813 2472 aaKnown RBP16.8■□□□□ 0.28
CLN6-224ENST00000638076 VWC2LB2RUY7 222 aa16.8■□□□□ 0.28
CLN6-224ENST00000638076 SLAQ13239 276 aa16.8■□□□□ 0.28
CLN6-224ENST00000638076 Q71RC1 249 aaPredicted RBP16.8■□□□□ 0.28
CLN6-224ENST00000638076 MS4A10Q96PG2 267 aa16.8■□□□□ 0.28
CLN6-224ENST00000638076 TXN2Q99757 166 aa16.8■□□□□ 0.28
CLN6-224ENST00000638076 SRIP30626 198 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 TPPP2P59282 170 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 C15orf32Q32M92 178 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 TCF24Q7RTU0 167 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 C10orf105Q8TEF2 133 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 TMEM190Q8WZ59 177 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 LINC01548A6NM66 108 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 PAFAH1B2P68402 229 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 CT83Q5H943 113 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 GDF5OSQ5U4N7 250 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 VN1R17PQ8TDU5 208 aa16.79■□□□□ 0.28
CLN6-224ENST00000638076 A8MWL6 223 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 GOSR1O95249 250 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 PKIAP61925 76 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 OR10J3Q5JRS4 329 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 TMEM75Q8N9X5 138 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 PRO1933Q9H354 126 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 TRBV6-1A0A0K0K1D8 114 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 G3V318 75 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 M0R3E3 92 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 RNF224P0DH78 156 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 PDE6HQ13956 83 aa16.78■□□□□ 0.28
CLN6-224ENST00000638076 IGHV3-35A0A0C4DH35 117 aa16.77■□□□□ 0.28
CLN6-224ENST00000638076 K7EQM0 130 aa16.77■□□□□ 0.28
CLN6-224ENST00000638076 COL8A1P27658 744 aa16.77■□□□□ 0.28
CLN6-224ENST00000638076 RHOGP84095 191 aa16.77■□□□□ 0.28
CLN6-224ENST00000638076 TMEM219Q86XT9 240 aa16.77■□□□□ 0.28
CLN6-224ENST00000638076 C5orf56Q8N8D9 126 aa16.77■□□□□ 0.28
CLN6-224ENST00000638076 GTSF1Q8WW33 167 aa16.77■□□□□ 0.28
CLN6-224ENST00000638076 ZFHX3Q15911 3703 aa16.77■□□□□ 0.27
CLN6-224ENST00000638076 DIRC3C9JPN6 131 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 GPR183P32249 361 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 CAMPP49913 170 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 ATP5J2P56134 94 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 IQCJQ1A5X6 159 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 ATP5L2Q7Z4Y8 100 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 ZNF502Q8TBZ5 544 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 ASCL2Q99929 193 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 RABAC1Q9UI14 185 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 IGHV1-69DA0A0B4J2H0 117 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 TSTD3H0UI37 97 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 ZNF253O75346 499 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 IGHV1-69P01742 117 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 BRD3OSQ6XYD6 125 aa16.76■□□□□ 0.27
CLN6-224ENST00000638076 AAMDCQ9H7C9 122 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms