RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 SOX21Q9Y651 276 aaPredicted RBP14.86□□□□□ -0.03
CLN5-216ENST00000636780 ODF3BA8MYP8 253 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 NDUFB8O95169 186 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 TMEM183BQ1AE95 376 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 VN1R17PQ8TDU5 208 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 TOMM20LQ6UXN7 152 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 ZNF491Q8N8L2 437 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 GTSF1Q8WW33 167 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 MBD6Q96DN6 1003 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 LINC00527Q9UJ94 153 aa14.85□□□□□ -0.03
CLN5-216ENST00000636780 IGHV3OR16-13A0A075B7E8 117 aa14.84□□□□□ -0.03
CLN5-216ENST00000636780 IGHV3-74A0A0B4J1X5 117 aa14.84□□□□□ -0.03
CLN5-216ENST00000636780 NTF3P20783 257 aa14.84□□□□□ -0.03
CLN5-216ENST00000636780 FOXA3P55318 350 aaPredicted RBP14.84□□□□□ -0.03
CLN5-216ENST00000636780 NOL4LQ96MY1 436 aaPredicted RBP14.84□□□□□ -0.03
CLN5-216ENST00000636780 IZUMO1RA6ND01 250 aa14.84□□□□□ -0.03
CLN5-216ENST00000636780 KRTDAPP60985 99 aa14.84□□□□□ -0.03
CLN5-216ENST00000636780 C2orf88Q9BSF0 95 aa14.84□□□□□ -0.03
CLN5-216ENST00000636780 ZNF331Q9NQX6 463 aaPredicted RBP14.84□□□□□ -0.03
CLN5-216ENST00000636780 NAGKQ9UJ70 344 aa14.84□□□□□ -0.03
CLN5-216ENST00000636780 FBXL7Q9UJT9 491 aa14.84□□□□□ -0.03
CLN5-216ENST00000636780 A8MWP6 167 aa14.83□□□□□ -0.03
CLN5-216ENST00000636780 GNG7O60262 68 aa14.83□□□□□ -0.03
CLN5-216ENST00000636780 APCSP02743 223 aa14.83□□□□□ -0.03
CLN5-216ENST00000636780 AMY1AP04745 511 aa14.83□□□□□ -0.03
CLN5-216ENST00000636780 Q56UQ5 140 aa14.83□□□□□ -0.03
CLN5-216ENST00000636780 GPR82Q96P67 336 aa14.83□□□□□ -0.03
CLN5-216ENST00000636780 MRPL27Q9P0M9 148 aaKnown RBP14.83□□□□□ -0.03
CLN5-216ENST00000636780 CBY1Q9Y3M2 126 aa14.83□□□□□ -0.03
CLN5-216ENST00000636780 IGHV3-66A0A0C4DH42 116 aa14.83□□□□□ -0.04
CLN5-216ENST00000636780 MUC21A0A0G2JKD1 596 aa14.83□□□□□ -0.04
CLN5-216ENST00000636780 MUC21A0A140T8X8 626 aa14.83□□□□□ -0.04
CLN5-216ENST00000636780 ZNF785A8K8V0 405 aa14.83□□□□□ -0.04
CLN5-216ENST00000636780 F8W735 103 aaPredicted RBP14.83□□□□□ -0.04
CLN5-216ENST00000636780 MUC21Q5SSG8 566 aa14.83□□□□□ -0.04
CLN5-216ENST00000636780 ATG101Q9BSB4 218 aa14.83□□□□□ -0.04
CLN5-216ENST00000636780 PMCHL1Q16048 86 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 NEU4Q8WWR8 484 aaPredicted RBP14.82□□□□□ -0.04
CLN5-216ENST00000636780 ARPC1AQ92747 370 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 RNF125Q96EQ8 232 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 ABCA2Q9BZC7 2435 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 CSPG4Q6UVK1 2322 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 A0A1W2PS18 150 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 TMEM11P17152 192 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 G0S2P27469 103 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 ECSCRQ19T08 205 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 ITLN2Q8WWU7 325 aaPredicted RBP14.82□□□□□ -0.04
CLN5-216ENST00000636780 CHRDL1Q9BU40 450 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 PAM16Q9Y3D7 125 aa14.82□□□□□ -0.04
CLN5-216ENST00000636780 USP9YO00507 2555 aaPredicted RBP14.81□□□□□ -0.04
CLN5-216ENST00000636780 HLA-DMBP28068 263 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 CEACAM3P40198 252 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 AMTP48728 403 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 TMEM219Q86XT9 240 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 C5orf17Q8NAS9 161 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 MLST8Q9BVC4 326 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 TBL2Q9Y4P3 447 aaKnown RBP14.81□□□□□ -0.04
CLN5-216ENST00000636780 G3V318 75 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 NDUFA3O95167 84 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 IGLV2-11P01706 119 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 EGR2P11161 476 aaPredicted RBP14.81□□□□□ -0.04
CLN5-216ENST00000636780 PAX1P15863 534 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 ATOH7Q8N100 152 aa14.81□□□□□ -0.04
CLN5-216ENST00000636780 IGHV3-49A0A0A0MS15 119 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 DTX2Q86UW9 622 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 STXBP6Q8NFX7 210 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 GRAMD2BQ96HH9 432 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 TPPP3Q9BW30 176 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 FAM208BQ5VWN6 2430 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 TPPP2P59282 170 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 PIP4P2Q8N4L2 257 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 NPBQ8NG41 125 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 TMUB1Q9BVT8 246 aa14.8□□□□□ -0.04
CLN5-216ENST00000636780 TMSB15BA0A087X1C1 80 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 M0R1W7 72 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 SAA4P35542 130 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 KLF12Q9Y4X4 402 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 SELENOKQ9Y6D0 94 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 IGHV7-81A0A0B4J1V7 117 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 GPX1P07203 203 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 HIST1H1EP10412 219 aaKnown RBP14.79□□□□□ -0.04
CLN5-216ENST00000636780 ZNF138P52744 262 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 PLP1P60201 277 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 AJUBAQ96IF1 538 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 C8orf49Q96NF6 230 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 LTAP01374 205 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 P01737 135 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 LCN12Q6JVE5 192 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 ZNF562Q6V9R5 426 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 BRD3OSQ6XYD6 125 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 TSKUQ8WUA8 353 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 SIRPDQ9H106 197 aa14.79□□□□□ -0.04
CLN5-216ENST00000636780 IGLV11-55A0A075B6I3 123 aa14.78□□□□□ -0.04
CLN5-216ENST00000636780 TRBV19A0A075B6N1 114 aa14.78□□□□□ -0.04
CLN5-216ENST00000636780 TRAV9-1A0A075B6T8 112 aa14.78□□□□□ -0.04
CLN5-216ENST00000636780 TOMM40O96008 361 aa14.78□□□□□ -0.04
CLN5-216ENST00000636780 SIGLECL1Q8N7X8 197 aa14.78□□□□□ -0.04
CLN5-216ENST00000636780 C18orf32Q8TCD1 76 aa14.78□□□□□ -0.04
CLN5-216ENST00000636780 ZC2HC1AQ96GY0 325 aa14.78□□□□□ -0.04
CLN5-216ENST00000636780 SHANK2-AS3Q9BTD1 123 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms