RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 OR5AL1P0C617 328 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 FAM90A15PP0C7V4 464 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 FAM90A13PP0C7W8 464 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 FAM90A14PP0C7W9 464 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 FAM90A24PP0C7X0 464 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 SAA4P35542 130 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 KIR2DS2P43631 304 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 CR1LQ2VPA4 569 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 SLC25A33Q9BSK2 321 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 AAMDCQ9H7C9 122 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 FOXA2Q9Y261 457 aaPredicted RBP8.82□□□□□ -1
FAM3A-221ENST00000612856 LSM4Q9Y4Z0 139 aaKnown RBP8.82□□□□□ -1
FAM3A-221ENST00000612856 IGHV2-26A0A0B4J1V2 119 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 K7EQM0 130 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 ZNF497Q6ZNH5 498 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 OR8A1Q8NGG7 326 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 CDC42EP3Q9UKI2 254 aa8.82□□□□□ -1
FAM3A-221ENST00000612856 IGKV1-5P01602 117 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 HLA-DQA1P01909 254 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 MT-ND6P03923 174 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 GAFA1Q96PS6 74 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 COL5A1P20908 1838 aaPredicted RBP8.81□□□□□ -1
FAM3A-221ENST00000612856 IGHV4-30-2A0A087WSY4 118 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 TRAV3A0A0B4J244 114 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 IGKV1-16P04430 117 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 IGHV1-8P0DP01 117 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 HIST1H1EP10412 219 aaKnown RBP8.81□□□□□ -1
FAM3A-221ENST00000612856 DIAPH2-AS1Q14236 149 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 TSKUQ8WUA8 353 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 STAB1Q9NY15 2570 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 IGLV3-1P01715 115 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 IL4P05112 153 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 TEPPQ6URK8 271 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 PCSK5Q92824 1860 aa8.81□□□□□ -1
FAM3A-221ENST00000612856 IGHV4-61A0A0C4DH41 118 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 SHISA9B4DS77 424 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 CORTO00230 105 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 NMUP48645 174 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 ODF3L1Q8IXM7 274 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 ZNF843Q8N446 348 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 SPSB4Q96A44 273 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 CLUHP3Q96NS8 147 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 MAP1LC3CQ9BXW4 147 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
FAM3A-221ENST00000612856 FLNAP21333 2647 aaKnown RBP8.8□□□□□ -1
FAM3A-221ENST00000612856 FLNCQ14315 2725 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 SRSF2Q01130 221 aaKnown RBP8.8□□□□□ -1
FAM3A-221ENST00000612856 ZBTB34Q8NCN2 500 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 TANC2Q9HCD6 1990 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 AMY1AP04745 511 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 IGF2-ASQ6U949 168 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 RBPMS2Q6ZRY4 209 aaKnown RBP8.8□□□□□ -1
FAM3A-221ENST00000612856 A0A1B0GV72 72 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.8□□□□□ -1
FAM3A-221ENST00000612856 J3QR89 54 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 ZNF138P52744 262 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 ZNF146Q15072 292 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 SPATA31B1PQ5VZV4 182 aa8.8□□□□□ -1
FAM3A-221ENST00000612856 SRSF12Q8WXF0 261 aaKnown RBP8.8□□□□□ -1
FAM3A-221ENST00000612856 BBC3Q96PG8 261 aaPredicted RBP8.8□□□□□ -1
FAM3A-221ENST00000612856 MRPS16Q9Y3D3 137 aaKnown RBP8.8□□□□□ -1
FAM3A-221ENST00000612856 IGLV3-9A0A075B6K5 115 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 NPIPB11E5RHQ5 1161 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 K7EP13 123 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 TMEM42Q69YG0 159 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 NCOR1P1Q9H4R4 102 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 F5H697 171 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 GCHFRP30047 84 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 MLANAQ16655 118 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 PPP1R27Q86WC6 154 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 FER1L6-AS1Q8NA97 138 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 TP53TG3Q9ULZ0 132 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 BAHCC1Q9P281 2608 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 TRBV20OR9-2A0A075B6H5 130 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 IGKV1-6A0A0C4DH72 117 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 FAM181BA6NEQ2 426 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 SEPSECSQ9HD40 501 aaKnown RBP8.79□□□□□ -1
FAM3A-221ENST00000612856 SPCS1Q9Y6A9 102 aa8.79□□□□□ -1
FAM3A-221ENST00000612856 FAM231BA6NCW3 169 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 LINC00473A8K010 186 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 MSMBP08118 114 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 GCSHP23434 173 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 CNTFRP26992 372 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 YPEL3P61236 119 aaPredicted RBP8.78□□□□□ -1
FAM3A-221ENST00000612856 C10orf113Q5VZT2 155 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 NUP37Q8NFH4 326 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 PRSS3P2Q8NHM4 247 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 PRORYQ9H606 182 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 LOC389332A0A1B0GUA5 103 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 C22orf46C9J442 243 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 MEF2CQ06413 473 aaPredicted RBP8.78□□□□□ -1
FAM3A-221ENST00000612856 GLMPQ8WWB7 406 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 TRAV8-6A0A0B4J262 113 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 A6NDN8 102 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 BMI1P35226 326 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 SCGB2A2Q13296 93 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 NDFIP1Q9BT67 221 aa8.78□□□□□ -1
FAM3A-221ENST00000612856 YTHDF2Q9Y5A9 579 aaKnown RBP8.78□□□□□ -1
FAM3A-221ENST00000612856 IGLC7A0M8Q6 106 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms