RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TVP23CQ96ET8 276 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST1H2BNQ99877 126 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 HIST1H2BMQ99879 126 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 DERL1Q9BUN8 251 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 TSSK6Q9BXA6 273 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 TCEAL2Q9H3H9 227 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 FAM60AQ9NP50 221 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 TAS2R8Q9NYW2 309 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 ZNF443Q9Y2A4 671 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 LINC00588Q9Y4M8 146 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 NCKAP5O14513 1909 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 TICRRQ7Z2Z1 1910 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 ATAD5Q96QE3 1844 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 PIK3C2AO00443 1686 aa2.12□□□□□ -2.07
SMCHD1-213ENST00000609587 CHD1O14646 1710 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 EML6Q6ZMW3 1958 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 A0A087X0T9 212 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 TRAV13-1A0A0B4J241 112 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 ODAMA1E959 279 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 OR2T1O43869 369 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 NAPSAO96009 420 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 PRM2P04554 102 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 ZNF705DP0CH99 300 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 COL8A2P25067 703 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 GUCA1AP43080 201 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 TMEM258P61165 79 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 CATR1Q13166 79 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 SSX8Q7RTT4 187 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 AAED1Q7RTV5 226 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 ADM2Q7Z4H4 148 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 TEN1Q86WV5 123 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 ATOH7Q8N100 152 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 ZFP62Q8NB50 900 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 OR4A5Q8NH83 315 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 BRK1Q8WUW1 75 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 RBPMSQ93062 196 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 ADAT1Q9BUB4 502 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 RERGLQ9H628 205 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 CKLFQ9UBR5 152 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 FUT9Q9Y231 359 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 CCDC88BA6NC98 1476 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 TEX14Q8IWB6 1497 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 TOPBP1Q92547 1522 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 MYH7BA7E2Y1 1941 aa2.11□□□□□ -2.07
SMCHD1-213ENST00000609587 KTN1Q86UP2 1357 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 NRKQ7Z2Y5 1582 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 COL18A1P39060 1754 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 OR51F1A6NGY5 319 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 OR2T8A6NH00 312 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 A8MWV9 139 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 H3BMG7 143 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 CST7O76096 145 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 IGKV1-16P04430 117 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 SLC25A5P05141 298 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 CTSDP07339 412 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 CXCL1P09341 107 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 GZMBP10144 247 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 LGALS3P17931 250 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 CRYBB3P26998 211 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 ZNF93P35789 620 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 FOXA1P55317 472 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 TPPP2P59282 170 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 HBBP68871 147 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 BSPH1Q075Z2 132 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 TMEM155Q4W5P6 130 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 SPANXN3Q5MJ09 141 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 AADACL3Q5VUY0 350 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 TMEM91Q6ZNR0 172 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 GTF2H5Q6ZYL4 71 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 ZFAND2AQ8N6M9 145 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 MORN4Q8NDC4 146 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 OR4K13Q8NH42 304 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 WFDC5Q8TCV5 224 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 AP1S3Q96PC3 154 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 MIEN1Q9BRT3 115 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 UPK3BQ9BT76 320 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 SPANXDQ9BXN6 97 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 DUSP21Q9H596 190 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 C11orf1Q9H5F2 150 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 IL36BQ9NZH7 164 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 NISCHQ9Y2I1 1504 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 DSCAMO60469 2012 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 KIAA1671Q9BY89 1806 aa2.1□□□□□ -2.07
SMCHD1-213ENST00000609587 CLIP1P30622 1438 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 CEP164Q9UPV0 1460 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 SVILO95425 2214 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 MAST2Q6P0Q8 1798 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 TRAV12-2A0A075B6T6 113 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 A0A1W2PNN7 141 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 BBIP1A8MTZ0 92 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 I3L521 148 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 TCRAP04437 139 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 CD14P08571 375 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 P0C880 135 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 IGHV3-30-3P0DP02 117 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 CCL5P13501 91 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 HLA-DRB4P13762 266 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 DYNLT3P51808 116 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 S100A10P60903 97 aa2.09□□□□□ -2.07
SMCHD1-213ENST00000609587 UBE2BP63146 152 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms