RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 CIRBPQ14011 172 aaKnown RBP10.37□□□□□ -0.75
DNMT1-228ENST00000592705 RNF5Q99942 180 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 IGHV2-26A0A0B4J1V2 119 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 TCRAP04437 139 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 HELZP42694 1942 aaKnown RBP10.37□□□□□ -0.75
DNMT1-228ENST00000592705 RHOGP84095 191 aa10.37□□□□□ -0.75
DNMT1-228ENST00000592705 MRPL16Q9NX20 251 aaKnown RBP10.37□□□□□ -0.75
DNMT1-228ENST00000592705 IGHV3OR16-8A0A075B7F1 116 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-228ENST00000592705 H7C1H1 209 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-228ENST00000592705 RSPO1Q2MKA7 263 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-228ENST00000592705 TMEM170BQ5T4T1 132 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
DNMT1-228ENST00000592705 LINC00205P59089 165 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 PSG1P11464 419 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 LCNL1Q6ZST4 164 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 NUP35Q8NFH5 326 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
DNMT1-228ENST00000592705 COL8A2P25067 703 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 FAM71F2Q6NXP2 309 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 LURAP1LQ8IV03 231 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 JKAMPQ9P055 326 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 LINC00527Q9UJ94 153 aa10.36□□□□□ -0.75
DNMT1-228ENST00000592705 HEATR5AQ86XA9 2040 aa10.35□□□□□ -0.75
DNMT1-228ENST00000592705 PHF3Q92576 2039 aaKnown RBP10.35□□□□□ -0.75
DNMT1-228ENST00000592705 F2Z2F3 143 aa10.35□□□□□ -0.75
DNMT1-228ENST00000592705 H3BUT2 72 aa10.35□□□□□ -0.75
DNMT1-228ENST00000592705 CACNG7P62955 275 aa10.35□□□□□ -0.75
DNMT1-228ENST00000592705 DMRTC2Q8IXT2 367 aaPredicted RBP10.35□□□□□ -0.75
DNMT1-228ENST00000592705 TMEM158Q8WZ71 300 aa10.35□□□□□ -0.75
DNMT1-228ENST00000592705 A0A1B0GWJ7 208 aa10.35□□□□□ -0.75
DNMT1-228ENST00000592705 RNASE2P10153 161 aaKnown RBP10.35□□□□□ -0.75
DNMT1-228ENST00000592705 IGHV2-5P01817 119 aa10.35□□□□□ -0.75
DNMT1-228ENST00000592705 SRSF1Q07955 248 aaKnown RBP eCLIP10.35□□□□□ -0.751e-6■■■■□ 20.3
DNMT1-228ENST00000592705 IGHV1-3A0A0C4DH29 117 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 DPM2O94777 84 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 C3orf79P0CE67 100 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 SEC11AP67812 179 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 DTX2Q86UW9 622 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 ORAOV1Q8WV07 137 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 GEMIN7Q9H840 131 aaKnown RBP10.34□□□□□ -0.75
DNMT1-228ENST00000592705 ZNF726P1Q15940 193 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 LINC01559Q495D7 138 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 Q0VG73 95 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 NDUFA3O95167 84 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 IGKV1-39P01597 117 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 IGKV1D-39P04432 117 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 MTURNQ8N3F0 131 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 RPRMLQ8N4K4 120 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 PIP4P2Q8N4L2 257 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 LYPD6BQ8NI32 183 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 IFI27L1Q96BM0 104 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 SCRT1Q9BWW7 348 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 TICRRQ7Z2Z1 1910 aa10.34□□□□□ -0.75
DNMT1-228ENST00000592705 PMS2P5A8MQ11 134 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 DLEU1O43261 78 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 RNASE4P34096 147 aaKnown RBP10.33□□□□□ -0.76
DNMT1-228ENST00000592705 KLRD1Q13241 179 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 ZNF329Q86UD4 541 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 ARL6IP6Q8N6S5 226 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 FANCMQ8IYD8 2048 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 PLXNB3Q9ULL4 1909 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 EXOC3-AS1Q8N2X6 119 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
DNMT1-228ENST00000592705 A8MWP6 167 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 TYMSP04818 313 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 HSD52Q0P140 79 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 ERVK11-1P61568 191 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 LHFPL4Q7Z7J7 247 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 DPH3P1Q9H4G8 78 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 A0A1B0GWB2 263 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 TOMM40O96008 361 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 LYPD1Q8N2G4 141 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 MYO18BQ8IUG5 2567 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 ORMDL2Q53FV1 153 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 OR9G4Q8NGQ1 327 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 VGLL1Q99990 258 aa10.32□□□□□ -0.76
DNMT1-228ENST00000592705 IGKV3OR2-268A0A0C4DH90 116 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 NDUFS6O75380 124 aaKnown RBP10.31□□□□□ -0.76
DNMT1-228ENST00000592705 IGKCP01834 107 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 SPOCK3Q9BQ16 436 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 NCOR1P1Q9H4R4 102 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 TNFRSF18Q9Y5U5 241 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 MED13LQ71F56 2210 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 A0A1B0GUS0 222 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 TDGF1P13385 188 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 PRTN3P24158 256 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 DKK4Q9UBT3 224 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 IGHV2-70P01814 119 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 SAA4P35542 130 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 C1QTNF4Q9BXJ3 329 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 PAX8Q06710 450 aa10.31□□□□□ -0.76
DNMT1-228ENST00000592705 GFRA4Q9GZZ7 299 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms