RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 C20orf85Q9H1P6 137 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 CENPEQ02224 2701 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHV2-26A0A0B4J1V2 119 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 LCE6AA0A183 80 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SNRPGP15A8MWD9 76 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 F5H5P2 479 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 LY6LH3BQJ8 138 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 UPK2O00526 184 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 GUCA2BQ16661 112 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 RSPO1Q2MKA7 263 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 RNASE10Q5GAN6 216 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SFXN4Q6P4A7 337 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 MORN3Q6PF18 240 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 Q6ZR03 302 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC16A13Q7RTY0 426 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 H1FOOQ8IZA3 346 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 LGI3Q8N145 548 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 C6orf223Q8N319 242 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 Q8N402 240 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 DEFB108BQ8NET1 73 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 TXNDC17Q9BRA2 123 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 TXNL4BQ9NX01 149 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 PKIGQ9Y2B9 76 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 ARL2-SNX15V9GYD0 113 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 DYSFO75923 2080 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 NINQ8N4C6 2090 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 CR1P17927 2039 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 FABP12A6NFH5 140 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 NCBP2LA6PVI3 153 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 A8MU10 97 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 M0R1X1 148 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 CDIPTO14735 213 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 HPGDSO60760 199 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 MT-CO2P00403 227 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 PKIAP61925 76 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 HBG1P69891 147 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 HBG2P69892 147 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 ABCA11PQ4W5N1 156 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 MPV17L2Q567V2 206 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 OR10J3Q5JRS4 329 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM69Q5SWH9 247 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF343Q6P1L6 599 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 WDFY1Q8IWB7 410 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 RPRMLQ8N4K4 120 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 Q8N6K4 173 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 C19orf18Q8NEA5 215 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 LFNGQ8NES3 379 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 OR1L8Q8NGR8 309 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SMIM4Q8WVI0 70 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 C4orf3Q8WVX3 66 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 H1FXQ92522 213 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 NDFIP1Q9BT67 221 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM243Q9BU79 118 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 OR51E2Q9H255 320 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC2A9Q9NRM0 540 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 TAS2R4Q9NYW5 299 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 TP53TG1Q9Y2A0 90 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 LSM5Q9Y4Y9 91 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 OR51B2Q9Y5P1 312 aa1.41□□□□□ -2.18
SMCHD1-211ENST00000584897 PKD1L1Q8TDX9 2849 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 IGKV1D-17A0A075B6S4 117 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM189A5PLL7 270 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 RFPL4AA6NLU0 287 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 ZFP92A6NM28 416 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 RFPL4AL1F8VTS6 287 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 K7EP13 123 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 OR7C1O76099 320 aaPredicted RBP1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 CDRT1O95170 752 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 SEC11BP0C7V7 166 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 COL8A2P25067 703 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 CXCL5P42830 114 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 CCL8P80075 99 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 QRFPP83859 136 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 BAXQ07812 192 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 SMCO1Q147U7 214 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 PRR4Q16378 134 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 GUK1Q16774 197 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 MORN2Q502X0 79 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 TRIQKQ629K1 86 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 EIF5AL1Q6IS14 154 aaKnown RBP1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 OLIG3Q7RTU3 272 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC35E3Q7Z769 313 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 TTC9CQ8N5M4 171 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF439Q8NDP4 499 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 PIFOQ8TCI5 191 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 DYNC2LI1Q8TCX1 351 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 DTD1Q8TEA8 209 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 ARL11Q969Q4 196 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 CNBD2Q96M20 576 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 AGMATQ9BSE5 352 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 NKX6-2Q9C056 277 aaPredicted RBP1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 ARL6Q9H0F7 186 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 LPAR5Q9H1C0 372 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 BIN3Q9NQY0 253 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF230Q9UIE0 474 aaPredicted RBP1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 NUBP2Q9Y5Y2 271 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 U3KQ87 197 aa1.4□□□□□ -2.18
SMCHD1-211ENST00000584897 IGKV1D-43A0A0B4J1Z2 117 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 TRAV8-2A0A0B4J237 113 aa1.4□□□□□ -2.19
SMCHD1-211ENST00000584897 IGHV3-35A0A0C4DH35 117 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 546 ms