RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 OR2K2Q8NGT1 345 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 PRADC1Q9BSG0 188 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 VWA8A3KMH1 1905 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 TMEM8BA6NDV4 472 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 SRRM4A7MD48 611 aaKnown RBP13.34□□□□□ -0.27
ERBB2-214ENST00000583038 TMEM238C9JI98 176 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 PLXNA3P51805 1871 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 RPL36AP83881 106 aaKnown RBP13.34□□□□□ -0.27
ERBB2-214ENST00000583038 ZNF415Q09FC8 603 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 ACTL10Q5JWF8 245 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 TMEM219Q86XT9 240 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 RPL36ALQ969Q0 106 aaKnown RBP13.34□□□□□ -0.27
ERBB2-214ENST00000583038 CHCHD5Q9BSY4 110 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 D6R8Y8 96 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 VCYO14598 125 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 ARTNQ5T4W7 220 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 Q6ZRM9 215 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 PLEKHB2Q96CS7 222 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 ANAPC10Q9UM13 185 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 MSRB2Q9Y3D2 182 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 ADARB2-AS1A8MUL3 147 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 LCN12Q6JVE5 192 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 SPOCK3Q9BQ16 436 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 C1QTNF4Q9BXJ3 329 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 ZNF562Q6V9R5 426 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 Q8TCH9 128 aa13.33□□□□□ -0.28
ERBB2-214ENST00000583038 PHF3Q92576 2039 aaKnown RBP13.33□□□□□ -0.28
ERBB2-214ENST00000583038 GFI1BQ5VTD9 330 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 ZSWIM8A7E2V4 1837 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 GATA3P23771 443 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 C1orf194Q5T5A4 169 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 NUP35Q8NFH5 326 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 TCF20Q9UGU0 1960 aaKnown RBP13.32□□□□□ -0.28
ERBB2-214ENST00000583038 FER1L5A0AVI2 2057 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 PAX2Q02962 417 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 KLF17Q5JT82 389 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-214ENST00000583038 LINC00469Q8N7U9 141 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 RCHY1Q96PM5 261 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 IGFL3Q6UXB1 125 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 ZNF479Q96JC4 524 aa13.32□□□□□ -0.28
ERBB2-214ENST00000583038 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.31□□□□□ -0.28
ERBB2-214ENST00000583038 CRPP02741 224 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 SHANK2-AS3Q9BTD1 123 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 GFRA4Q9GZZ7 299 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 ZNF688P0C7X2 276 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 THSD7BQ9C0I4 1608 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 FAM231BA6NCW3 169 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 SH2D1AO60880 128 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 DOCK8Q8NF50 2099 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 RLFQ13129 1914 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 TRAV2A0A0B4J234 112 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 NDUFB8O95169 186 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 UNQ6494/PRO21346Q6UXR6 183 aa13.31□□□□□ -0.28
ERBB2-214ENST00000583038 ZNF876PQ49A33 203 aa13.3□□□□□ -0.28
ERBB2-214ENST00000583038 DOCK7Q96N67 2140 aa13.3□□□□□ -0.28
ERBB2-214ENST00000583038 ZNF407Q9C0G0 2248 aa13.3□□□□□ -0.28
ERBB2-214ENST00000583038 E7EQL1 145 aa13.3□□□□□ -0.28
ERBB2-214ENST00000583038 GNLYP22749 145 aa13.3□□□□□ -0.28
ERBB2-214ENST00000583038 CD300EQ496F6 205 aaPredicted RBP13.3□□□□□ -0.28
ERBB2-214ENST00000583038 FAM90A2PQ658T7 463 aa13.3□□□□□ -0.28
ERBB2-214ENST00000583038 A0A087WX48 190 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 TRAV8-2A0A0B4J237 113 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 COL8A2P25067 703 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 LYPD2Q6UXB3 125 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 IGKV1-6A0A0C4DH72 117 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 IGKV1-16P04430 117 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 SRD5A1P18405 259 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 YPEL3P61236 119 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-214ENST00000583038 DAZ1Q9NQZ3 744 aaKnown RBP13.29□□□□□ -0.28
ERBB2-214ENST00000583038 ZNF581Q9P0T4 197 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 C1orf147Q96MC9 270 aaPredicted RBP13.29□□□□□ -0.28
ERBB2-214ENST00000583038 SAP30O75446 220 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 TMEM14BQ9NUH8 114 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 ERG28Q9UKR5 140 aa13.29□□□□□ -0.28
ERBB2-214ENST00000583038 A0A1W2PPI3 338 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 A8MWV9 139 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 NCR2O95944 276 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 BRD3OSQ6XYD6 125 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 Q86TA4 180 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 RHPN1-AS1Q9BWJ2 59 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 IGKV3D-20A0A0C4DH25 116 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 CFHR2P36980 270 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 UBE2E1P51965 193 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 C5orf24Q7Z6I8 188 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 K7ENP7 123 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 SAA4P35542 130 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 MRPL52Q86TS9 123 aaKnown RBP13.28□□□□□ -0.28
ERBB2-214ENST00000583038 LINC01356Q8N9X3 169 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 BPESC1Q9GZL8 116 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 PGPEP1Q9NXJ5 209 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 ZNF492Q9P255 531 aa13.28□□□□□ -0.28
ERBB2-214ENST00000583038 FNDC1Q4ZHG4 1894 aaPredicted RBP13.27□□□□□ -0.28
ERBB2-214ENST00000583038 CT83Q5H943 113 aa13.27□□□□□ -0.28
ERBB2-214ENST00000583038 TEX43Q6ZNM6 134 aa13.27□□□□□ -0.29
ERBB2-214ENST00000583038 ZNF329Q86UD4 541 aa13.27□□□□□ -0.29
ERBB2-214ENST00000583038 FAM110DQ8TAY7 271 aaPredicted RBP13.27□□□□□ -0.29
ERBB2-214ENST00000583038 RNF166Q96A37 237 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms