RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 OR51A4Q8NGJ6 313 aa1.09□□□□□ -2.23
CHD3-217ENST00000574022 BRK1Q8WUW1 75 aa1.09□□□□□ -2.23
CHD3-217ENST00000574022 AP1S3Q96PC3 154 aa1.09□□□□□ -2.23
CHD3-217ENST00000574022 RETNLBQ9BQ08 111 aa1.09□□□□□ -2.23
CHD3-217ENST00000574022 SLC50A1Q9BRV3 221 aa1.09□□□□□ -2.23
CHD3-217ENST00000574022 TIMM21Q9BVV7 248 aa1.09□□□□□ -2.23
CHD3-217ENST00000574022 PAIP2BQ9ULR5 123 aaKnown RBP1.09□□□□□ -2.23
CHD3-217ENST00000574022 HIGD1AQ9Y241 93 aa1.09□□□□□ -2.23
CHD3-217ENST00000574022 HEATR5AQ86XA9 2040 aa1.09□□□□□ -2.24
CHD3-217ENST00000574022 FER1L6Q2WGJ9 1857 aa1.09□□□□□ -2.24
CHD3-217ENST00000574022 COL4A2P08572 1712 aa1.09□□□□□ -2.24
CHD3-217ENST00000574022 RTL9Q8NET4 1388 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 KDM5CP41229 1560 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 LTBP2Q14767 1821 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 SOGA1O94964 1423 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 NCOA3Q9Y6Q9 1424 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 A0A0G2JQZ4 141 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 SPRR5A0A1B0GTR4 108 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 A0A1B0GW64 132 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 EFCAB10A6NFE3 127 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 ZNF705FA8MVS1 300 aaPredicted RBP1.08□□□□□ -2.24
CHD3-217ENST00000574022 IBA57-AS1B1ANH7 110 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 OR1I1O60431 355 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 PROSCO94903 275 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 PAEPP09466 180 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 BAALC-AS2P0C853 105 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 MPC1LP0DKB6 136 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 HES1Q14469 280 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 RNASE10Q5GAN6 216 aaKnown RBP1.08□□□□□ -2.24
CHD3-217ENST00000574022 KRTAP5-3Q6L8H2 238 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 FAM216BQ8N7L0 139 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 OR4B1Q8NGF8 309 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 OR5H6Q8NGV6 325 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 ZNF418Q8TF45 676 aaPredicted RBP1.08□□□□□ -2.24
CHD3-217ENST00000574022 PRELID3AQ96N28 172 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 MCEEQ96PE7 176 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 VPS25Q9BRG1 176 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 CXCL16Q9H2A7 254 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 CST9LQ9H4G1 147 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 TPT1P8Q9HAU6 139 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 C14orf132Q9NPU4 83 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 CBLN4Q9NTU7 201 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 LHFPL6Q9Y693 200 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 ARHGEF11O15085 1522 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 DLC1Q96QB1 1528 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 EML6Q6ZMW3 1958 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 DSPPQ9NZW4 1301 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 CCDC88CQ9P219 2028 aa1.08□□□□□ -2.24
CHD3-217ENST00000574022 RTEL1-TNFRSF6BF6WH68 1400 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 FAM135BQ49AJ0 1406 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 SHANK1Q9Y566 2161 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 PTPRBP23467 1997 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 IGKV3D-11A0A0A0MRZ8 115 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 TRGV4A0A0C4DH28 118 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 TRBV27A0A0K0K1C4 114 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 H3BMG7 143 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 LY6LH3BQJ8 138 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 H3BRN7 92 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 NDUFA2O43678 99 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 UBL3O95164 117 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 C1QCP02747 245 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 MT-ND4LP03901 98 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 ASAH2BP0C7U1 165 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 MIFP14174 115 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 CRYGSP22914 178 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 RPL22P35268 128 aaKnown RBP1.07□□□□□ -2.24
CHD3-217ENST00000574022 SSR2P43308 183 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 ELOBQ15370 118 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 TPRXLQ17RH7 258 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 Q5XG85 94 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 Q8IYB0 196 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 LRRC18Q8N456 261 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 TSTD1Q8NFU3 115 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 OR5A2Q8NGI9 324 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 RNASE11Q8TAA1 199 aaKnown RBP1.07□□□□□ -2.24
CHD3-217ENST00000574022 POP5Q969H6 163 aaKnown RBP1.07□□□□□ -2.24
CHD3-217ENST00000574022 CHCHD1Q96BP2 118 aaKnown RBP1.07□□□□□ -2.24
CHD3-217ENST00000574022 SMIM3Q9BZL3 60 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 CALML5Q9NZT1 146 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 LY96Q9Y6Y9 160 aa1.07□□□□□ -2.24
CHD3-217ENST00000574022 MYO5AQ9Y4I1 1855 aaKnown RBP1.07□□□□□ -2.24
CHD3-217ENST00000574022 OVOS2A0A0J9YW53 1432 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 OVOS2Q6IE36 1432 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 KIAA1107Q9UPP5 1409 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 PXDNLA1KZ92 1463 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 MEIKINA0A087WXM9 373 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 IGKV2D-26A0A0A0MRZ7 120 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 A0A1W2PNU3 283 aaPredicted RBP1.06□□□□□ -2.24
CHD3-217ENST00000574022 OR2T8A6NH00 312 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 C5orf58C9J3I9 102 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 C17orf112F2Z3M2 114 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 M0R233 179 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 M0R2Z0 102 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 LYRM1O43325 122 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 ZNF737O75373 536 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 CRPP02741 224 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 FABP4P15090 132 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 EVI2AP22794 236 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 RAB5CP51148 216 aa1.06□□□□□ -2.24
CHD3-217ENST00000574022 ROMO1P60602 79 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms