RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TMEM147Q9BVK8 224 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 WDR12Q9GZL7 423 aaKnown RBP3.47□□□□□ -1.85
CLK3-219ENST00000567805 C20orf85Q9H1P6 137 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 SAV1Q9H4B6 383 aaPredicted RBP3.47□□□□□ -1.85
CLK3-219ENST00000567805 CLEC5AQ9NY25 188 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 PSENENQ9NZ42 101 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 TBC1D24Q9ULP9 559 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 HLA-DRB4X5D2U9 266 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 X6R8D5 127 aa3.47□□□□□ -1.85
CLK3-219ENST00000567805 SMCO3A2RU48 225 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 PMS2P5A8MQ11 134 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 PLA2G10O15496 165 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 LYRM1O43325 122 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 TSC22D2O75157 780 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 IL5P05113 134 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 ORM2P19652 201 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 GATA2P23769 480 aaPredicted RBP3.46□□□□□ -1.86
CLK3-219ENST00000567805 PAX9P55771 341 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 TAS2R30P59541 319 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 PLP1P60201 277 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 SELENOTP62341 195 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 DLK1P80370 383 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 ODF1Q14990 250 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 IAH1Q2TAA2 248 aaPredicted RBP3.46□□□□□ -1.86
CLK3-219ENST00000567805 GDF5OSQ5U4N7 250 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 LGALS9CQ6DKI2 356 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 KRTAP5-3Q6L8H2 238 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 EBLN2Q6P2I7 272 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 TMEM14EPQ6UXP3 125 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 ZNF705AQ6ZN79 300 aaPredicted RBP3.46□□□□□ -1.86
CLK3-219ENST00000567805 TMEM182Q6ZP80 229 aaPredicted RBP3.46□□□□□ -1.86
CLK3-219ENST00000567805 LINC00299Q6ZSB3 139 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 CYP2G1PQ6ZSU1 146 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 S100A7AQ86SG5 101 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 ZBTB8BQ8NAP8 495 aaPredicted RBP3.46□□□□□ -1.86
CLK3-219ENST00000567805 CLRN3Q8NCR9 226 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 OR10P1Q8NGE3 313 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 OR1B1Q8NGR6 318 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 C16orf92Q96LL3 132 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 LINC00052Q96N35 136 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 NEU1Q99519 415 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 CCDC32Q9BV29 185 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 SLC25A32Q9H2D1 315 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 SLC25A22Q9H936 323 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 NPVFQ9HCQ7 196 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 RPRMQ9NS64 109 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 AP5S1Q9NUS5 200 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 XCL2Q9UBD3 114 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 MGAT4CQ9UBM8 478 aa3.46□□□□□ -1.86
CLK3-219ENST00000567805 RCL1Q9Y2P8 373 aaKnown RBP3.46□□□□□ -1.86
CLK3-219ENST00000567805 HECTD4Q9Y4D8 3996 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 TRAV6A0A075B6T7 132 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 TRAV10A0A0B4J240 114 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 A0A0J9YX75 114 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 C7orf66A4D0T2 115 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 TMEM189A5PLL7 270 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 SMIM9A6NGZ8 99 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 A8MTW9 85 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 ZNF705FA8MVS1 300 aaPredicted RBP3.45□□□□□ -1.86
CLK3-219ENST00000567805 H3BRN7 92 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 K7EPK0 472 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 HYPMO75409 117 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 IGKV3-20P01619 116 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 MBPP02686 304 aaPredicted RBP3.45□□□□□ -1.86
CLK3-219ENST00000567805 TCRBP04435 133 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 METTL15P1P0C7V9 234 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 LINC00869P0C866 280 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 ZNF705DP0CH99 300 aaPredicted RBP3.45□□□□□ -1.86
CLK3-219ENST00000567805 ZNF705BP0CI00 300 aaPredicted RBP3.45□□□□□ -1.86
CLK3-219ENST00000567805 RPL7P18124 248 aaKnown RBP3.45□□□□□ -1.86
CLK3-219ENST00000567805 HLA-DMBP28068 263 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 DEFB1P60022 68 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 RAP2BP61225 183 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 RRAS2P62070 204 aaPredicted RBP3.45□□□□□ -1.86
CLK3-219ENST00000567805 PSG9Q00887 426 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 ZNF846Q147U1 533 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 PXDC1Q5TGL8 231 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 TEPPQ6URK8 271 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 Q6ZTC4 211 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 ZNF709Q8N972 641 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 OR4B1Q8NGF8 309 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 SHANK2-AS3Q9BTD1 123 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 RSG1Q9BU20 258 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 GGACTQ9BVM4 153 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 SLC25A39Q9BZJ4 359 aaPredicted RBP3.45□□□□□ -1.86
CLK3-219ENST00000567805 NUDT15Q9NV35 164 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 GSKIPQ9P0R6 139 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 DOK5Q9P104 306 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 RNF24Q9Y225 148 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 HIGD1AQ9Y241 93 aa3.45□□□□□ -1.86
CLK3-219ENST00000567805 DNAH2Q9P225 4427 aa3.44□□□□□ -1.86
CLK3-219ENST00000567805 IGHV3OR16-12A0A075B7B8 117 aa3.44□□□□□ -1.86
CLK3-219ENST00000567805 A0A087X0K7 114 aa3.44□□□□□ -1.86
CLK3-219ENST00000567805 FAM240BA0A1B0GVZ2 78 aa3.44□□□□□ -1.86
CLK3-219ENST00000567805 C5orf51A6NDU8 294 aa3.44□□□□□ -1.86
CLK3-219ENST00000567805 FAM25EA8MYX2 175 aa3.44□□□□□ -1.86
CLK3-219ENST00000567805 IGLL5B9A064 214 aa3.44□□□□□ -1.86
CLK3-219ENST00000567805 F6UB75 175 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms