RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 RPP21Q9H633 154 aaKnown RBP16.7■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 MOB4Q9Y3A3 225 aa16.7■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 ACACBO00763 2458 aa16.7■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 CA1P00915 261 aaPredicted RBP16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 CTSGP08311 255 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 JOSD1Q15040 202 aaPredicted RBP16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 MRPL54Q6P161 138 aaKnown RBP16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 SIGLEC15Q6ZMC9 328 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 C5orf56Q8N8D9 126 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 OR5R1Q8NH85 324 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 DAZAP1Q96EP5 407 aaKnown RBP16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 SGK494Q96LW2 274 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 RPL7P18124 248 aaKnown RBP16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 RAB4BP61018 213 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 Q0VG73 95 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 GOLT1AQ6ZVE7 132 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 TMEM75Q8N9X5 138 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 RABAC1Q9UI14 185 aa16.69■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 P01737 135 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 IGHV3-23P01764 117 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 FRMD6-AS1P0C7T7 363 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 DSCR9P59020 149 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 SLC35B1P78383 322 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 RHOGP84095 191 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 ZNF502Q8TBZ5 544 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 PRSS22Q9GZN4 317 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 AAMDCQ9H7C9 122 aa16.68■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 A8MWL6 223 aa16.67■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 BMPR1BO00238 502 aa16.67■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 PSG9Q00887 426 aa16.67■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 C15orf32Q32M92 178 aa16.67■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 ATP5L2Q7Z4Y8 100 aa16.67■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 NUP35Q8NFH5 326 aa16.67■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 MEGF9Q9H1U4 602 aa16.67■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 ZFP30Q9Y2G7 519 aa16.67■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 C19orf71A6NCJ1 209 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 TMEM256Q8N2U0 113 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 C17orf77Q96MU5 243 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 SERTM2A0A1B0GWG4 89 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 GRIFINA4D1Z8 144 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 IGLV2-11P01706 119 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 ESDP10768 282 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 PRNTQ86SH4 94 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 ARL6IP6Q8N6S5 226 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 OR4B1Q8NGF8 309 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 NEU1Q99519 415 aa16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 SOX21Q9Y651 276 aaPredicted RBP16.66■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 IGHV4-30-2A0A087WSY4 118 aa16.65■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 TRAV40A0A0B4J280 105 aa16.65■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 APCSP02743 223 aa16.65■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 PAFAH1B2P68402 229 aa16.65■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 BAGE3Q86Y29 109 aa16.65■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 GFRA4Q9GZZ7 299 aa16.65■□□□□ 0.26
VPS9D1-AS1-202ENST00000562866 IGHV3OR16-10A0A075B7F0 116 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 HIGD1CA8MV81 97 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 CSN1S1P47710 185 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 RAB9AP51151 201 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 OR10J3Q5JRS4 329 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 EEF1AKMT3Q96AZ1 226 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 FAM231BA6NCW3 169 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 DIRC3C9JPN6 131 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 MSMBP08118 114 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TPPP2P59282 170 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 PSG3Q16557 428 aa16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 BCL6BQ8N143 479 aaPredicted RBP16.64■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TRAV8-1A0A0A6YYK1 113 aa16.63■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TRBV7-1A0A0A6YYK4 115 aa16.63■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 RNF224P0DH78 156 aa16.63■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 GPR183P32249 361 aa16.63■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 CRIP2P52943 208 aaPredicted RBP16.63■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 PSG8Q9UQ74 426 aa16.63■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 A0A1B0GUS0 222 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 NPIPB6E9PJ23 425 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 ZNF253O75346 499 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 GZMBP10144 247 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 PAX1P15863 534 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 CDPF1Q6NVV7 123 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 BRD3OSQ6XYD6 125 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 LINC00322Q6ZN03 302 aaPredicted RBP16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 ATP6V0BQ99437 205 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TP53TG3Q9ULZ0 132 aa16.62■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 FBLL1A6NHQ2 334 aaKnown RBP16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 G3V318 75 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 COL8A1P27658 744 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TMEM219Q86XT9 240 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 PIFOQ8TCI5 191 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 WNK2Q9Y3S1 2297 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TRAV41A0A0B4J266 112 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 LINC00587B1AMM8 73 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 SERF1AO75920 110 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 CLEC3BP05452 202 aa16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 CIARTQ8N365 385 aaPredicted RBP16.61■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 SH2D7A6NKC9 451 aaPredicted RBP16.6■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 LINC01548A6NM66 108 aa16.6■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 B4DSR2 109 aa16.6■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 NUPR1O60356 82 aa16.6■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TOMM20LQ6UXN7 152 aa16.6■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 PRDM13Q9H4Q3 707 aa16.6■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 GNB4Q9HAV0 340 aa16.6■□□□□ 0.25
VPS9D1-AS1-202ENST00000562866 TACC2O95359 2948 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms