RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 ELOBQ15370 118 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 C9orf163Q8N9P6 203 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 RNASE11Q8TAA1 199 aaKnown RBP1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 ZNF418Q8TF45 676 aaPredicted RBP1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 MAFIPQ8WZ33 124 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 OR2H1Q9GZK4 316 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 CACYBPQ9HB71 228 aaKnown RBP1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 GSKIPQ9P0R6 139 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 NAT8BQ9UHF3 227 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 HS3ST2Q9Y278 367 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 LHFPL6Q9Y693 200 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 PCDH15Q96QU1 1955 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 GBF1Q92538 1859 aa1.5□□□□□ -2.17
CTDSPL2-207ENST00000559738 A8MWV9 139 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 RER1O15258 196 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 LYZL6O75951 148 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 PROSCO94903 275 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 DHFRP00374 187 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 CRPP02741 224 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 MT-ND6P03923 174 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 IFNA4P05014 189 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 GPX2P18283 190 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 SDC2P34741 201 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 RPL35P42766 123 aaKnown RBP1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 SSR2P43308 183 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 ZNF846Q147U1 533 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 SMCO1Q147U7 214 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 OR8B8Q15620 311 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 TEX29Q8N6K0 151 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 RETNLBQ9BQ08 111 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 SPANXA1Q9NS26 97 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 BCL9O00512 1426 aa1.49□□□□□ -2.17
CTDSPL2-207ENST00000559738 TRPM1Q7Z4N2 1603 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 BRWD1Q9NSI6 2320 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 TRAV5A0A0B4J249 113 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 KPNA4O00629 521 aaPredicted RBP1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 OVOL1O14753 267 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 DEGS1O15121 323 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 UBL3O95164 117 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 BAALC-AS2P0C853 105 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 NDUFA6P56556 154 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 KLRD1Q13241 179 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 KRTAP13-4Q3LI77 160 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 VMA21Q3ZAQ7 101 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 C4orf22Q6V702 233 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 Q8IYB0 196 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 OR5D16Q8NGK9 328 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 LINC00467Q9BRT7 94 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 TCEAL2Q9H3H9 227 aaPredicted RBP1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 C14orf132Q9NPU4 83 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 JPT1Q9UK76 154 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 DISP1Q96F81 1524 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 MYLKQ15746 1914 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 TRAPPC8Q9Y2L5 1435 aa1.48□□□□□ -2.17
CTDSPL2-207ENST00000559738 HEATR5BQ9P2D3 2071 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 MUC6Q6W4X9 2439 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 ARHGEF11O15085 1522 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 RP1P56715 2156 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 TRAV36DV7A0A075B6V5 113 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 A0A087WX48 190 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 MEIKINA0A087WXM9 373 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 MIFP14174 115 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 AKR1C3P42330 323 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 S100A12P80511 92 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 CCDC153Q494R4 210 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 PATE2Q6UY27 113 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 LINC00305Q7Z4B0 112 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 LINC00311Q8N616 119 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 TMEM229BQ8NBD8 167 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 OR2T35Q8NGX2 323 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 POP5Q969H6 163 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 CHCHD1Q96BP2 118 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 FAM107BQ9H098 131 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 TMEM138Q9NPI0 162 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 TAS2R7Q9NYW3 318 aa1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 MDC1Q14676 2089 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 ZFC3H1O60293 1989 aaKnown RBP1.47□□□□□ -2.17
CTDSPL2-207ENST00000559738 ICE1Q9Y2F5 2266 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 ARAP1Q96P48 1450 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 TRAV14DV4A0A0A6YYC5 116 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 LOC107984640A0A0U1RRK4 108 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 OR1I1O60431 355 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 CMPK1P30085 196 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 GTF2A1P52655 376 aaPredicted RBP1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 Q1T7F1 81 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 DEFB113Q30KQ7 82 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 OR8I2Q8N0Y5 310 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 OR5D14Q8NGL3 314 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 OR5H6Q8NGV6 325 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 BORCS5Q969J3 196 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 LXNQ9BS40 222 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 TMEM106BQ9NUM4 274 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 LY96Q9Y6Y9 160 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 OVOS2A0A0G2JMS6 1433 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 PCNX2A6NKB5 2137 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 FRMPD1Q5SYB0 1578 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 BAHCC1Q9P281 2608 aa1.46□□□□□ -2.18
CTDSPL2-207ENST00000559738 FBN3Q75N90 2809 aa1.45□□□□□ -2.18
CTDSPL2-207ENST00000559738 CEP192Q8TEP8 1941 aa1.45□□□□□ -2.18
CTDSPL2-207ENST00000559738 IGHV1-58A0A0C4DH39 117 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms