RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 HEATR1Q9H583 2144 aaKnown RBP12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 A0A1W2PRX2 142 aa12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 NCR2O95944 276 aa12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 RIPPLY3P57055 190 aa12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 MLANAQ16655 118 aa12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 LYPD2Q6UXB3 125 aa12.48□□□□□ -0.41
ARHGEF40-202ENST00000553709 TOMM7Q9P0U1 55 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 SMPXQ9UHP9 88 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 SEC11AP67812 179 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 LINC01559Q495D7 138 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 PLA2G2CQ5R387 149 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 TMEM219Q86XT9 240 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 CD33P20138 364 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 HSD52Q0P140 79 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 PSG3Q16557 428 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 LYPD1Q8N2G4 141 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 LIME1Q9H400 295 aa12.47□□□□□ -0.41
ARHGEF40-202ENST00000553709 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 MRPL27Q9P0M9 148 aaKnown RBP12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 MYO7BQ6PIF6 2116 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 C3orf79P0CE67 100 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 SRD5A1P18405 259 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 LAGE3Q14657 143 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 ZNF329Q86UD4 541 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 STHQ8IWL8 128 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 HEATR5AQ86XA9 2040 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 PTPRSQ13332 1948 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 TRAV8-1A0A0A6YYK1 113 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 PAX9P55771 341 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 LURAP1LQ8IV03 231 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 MEGF9Q9H1U4 602 aa12.46□□□□□ -0.41
ARHGEF40-202ENST00000553709 CNTFRP26992 372 aa12.46□□□□□ -0.42
ARHGEF40-202ENST00000553709 SH2D1AO60880 128 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 TOMM40O96008 361 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 ZNF138P52744 262 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 ERVK11-1P61568 191 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 SLC25A2Q9BXI2 301 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 ZNF815PA8K554 130 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 BEND2Q8NDZ0 799 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 LINC01549A6NIU2 74 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 TSPAN13O95857 204 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 OR9G4Q8NGQ1 327 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 Q8TAT8 98 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 PLXND1Q9Y4D7 1925 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 C9orf139Q6ZV77 190 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 WFDC12Q8WWY7 111 aa12.45□□□□□ -0.42
ARHGEF40-202ENST00000553709 RSPO1Q2MKA7 263 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 LCN12Q6JVE5 192 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 OR5A1Q8NGJ0 315 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 COL8A2P25067 703 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 SFTA2Q6UW10 78 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 DSCR9P59020 149 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 DMRTC2Q8IXT2 367 aaPredicted RBP12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 RPRMLQ8N4K4 120 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 TRBV7-1A0A0A6YYK4 115 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 A0A1W2PPI3 338 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 TMEM14BQ9NUH8 114 aa12.44□□□□□ -0.42
ARHGEF40-202ENST00000553709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 HOXA3O43365 443 aaPredicted RBP12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 OR2K2Q8NGT1 345 aa12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 PKDREJQ9NTG1 2253 aa12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 CD28P10747 220 aa12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 Q86TA4 180 aa12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 RNF182Q8N6D2 247 aa12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 LINC00479Q96M42 142 aa12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 SRSF8Q9BRL6 282 aaKnown RBP12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 IGKV3D-20A0A0C4DH25 116 aa12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 TMEM8BA6NDV4 472 aa12.43□□□□□ -0.42
ARHGEF40-202ENST00000553709 IGKV1-39P01597 117 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 IGKV1D-39P04432 117 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 CD300EQ496F6 205 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 Q6ZR03 302 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 WDR86Q86TI4 376 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 ZNRD1Q9P1U0 126 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 DLEU1O43261 78 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 PFN1P07737 140 aaKnown RBP12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 TRBV7-9A0A0J9YWB2 115 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 E7EQL1 145 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 GTSCR1Q86UQ5 136 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 ZNF664Q8N3J9 261 aa12.42□□□□□ -0.42
ARHGEF40-202ENST00000553709 ZNF407Q9C0G0 2248 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 hDV102S1A0JD36 115 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 ZNF503-AS2A6NEH8 195 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 SYS1-DBNDD2H3BUS1 97 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 NDPQ00604 133 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 ZNF479Q96JC4 524 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 SHANK2-AS3Q9BTD1 123 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 GATA4P43694 442 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 MSRB2Q9Y3D2 182 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 TRAV2A0A0B4J234 112 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 TDGF1P13385 188 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 KIAA1549LQ6ZVL6 1849 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 H3BUX3 64 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 GUSBP1Q15486 140 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 BRD3OSQ6XYD6 125 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 C10orf126Q8N4M7 172 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 CACNA1GO43497 2377 aa12.41□□□□□ -0.42
ARHGEF40-202ENST00000553709 LY6HO94772 140 aa12.4□□□□□ -0.42
ARHGEF40-202ENST00000553709 TMEM155Q4W5P6 130 aa12.4□□□□□ -0.42
ARHGEF40-202ENST00000553709 IGFL4Q6B9Z1 124 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms