RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 ZNF318Q5VUA4 2279 aa9.39□□□□□ -0.91
SYNE2-208ENST00000553289 SRRM4A7MD48 611 aaKnown RBP9.39□□□□□ -0.91
SYNE2-208ENST00000553289 M0R2P5 195 aa9.39□□□□□ -0.91
SYNE2-208ENST00000553289 CACNA1EQ15878 2313 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 THSD7BQ9C0I4 1608 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 H3BUX3 64 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 IGHV4-39P01824 125 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 GATA4P43694 442 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 Q86TA4 180 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 ZNF492Q9P255 531 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 Q6ZRM9 215 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 MEGF9Q9H1U4 602 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 LINC00527Q9UJ94 153 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 IGKV3D-20A0A0C4DH25 116 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 KLF17Q5JT82 389 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-208ENST00000553289 NDUFS8O00217 210 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 NDUFB8O95169 186 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 NCR2O95944 276 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 TEX43Q6ZNM6 134 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 TMEM219Q86XT9 240 aa9.38□□□□□ -0.91
SYNE2-208ENST00000553289 C3orf79P0CE67 100 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 RASL10AQ92737 203 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 C1QTNF4Q9BXJ3 329 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 SYS1-DBNDD2H3BUS1 97 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 ZNF876PQ49A33 203 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 CT83Q5H943 113 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 ARTNQ5T4W7 220 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 E9PQ18 207 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 Q0VG73 95 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 TMEM95Q3KNT9 176 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 TMEM256Q8N2U0 113 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 TMEM14BQ9NUH8 114 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 ZNF581Q9P0T4 197 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 VWA8A3KMH1 1905 aa9.37□□□□□ -0.91
SYNE2-208ENST00000553289 ZNF688P0C7X2 276 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 SRD5A1P18405 259 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 ZNF562Q6V9R5 426 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 TMEM75Q8N9X5 138 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 GATA3P23771 443 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 YPEL3P61236 119 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-208ENST00000553289 CRIM1Q9NZV1 1036 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 GUSBP1Q15486 140 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 SIGMAR1Q99720 223 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 IGKV1-6A0A0C4DH72 117 aa9.36□□□□□ -0.91
SYNE2-208ENST00000553289 BCL6BQ8N143 479 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-208ENST00000553289 SRSF6Q13247 344 aaKnown RBP9.35□□□□□ -0.91
SYNE2-208ENST00000553289 LHFPL4Q7Z7J7 247 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 DAZ1Q9NQZ3 744 aaKnown RBP9.35□□□□□ -0.91
SYNE2-208ENST00000553289 RLFQ13129 1914 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 INSP01308 110 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 LYPD2Q6UXB3 125 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 FAM110DQ8TAY7 271 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-208ENST00000553289 SAP30O75446 220 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 IGKV1-16P04430 117 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 ADCYAP1P18509 176 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 LINC00158P58513 81 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 MST1LQ2TV78 715 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 C5orf24Q7Z6I8 188 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 OVOL2Q9BRP0 275 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 A0A1W2PPI3 338 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 COL8A2P25067 703 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 PYY3Q5JQD4 70 aa9.35□□□□□ -0.91
SYNE2-208ENST00000553289 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 Q8TAT8 98 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 C1orf147Q96MC9 270 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-208ENST00000553289 RHPN1-AS1Q9BWJ2 59 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 E7EQL1 145 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 RTTNQ86VV8 2226 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 A0A087WX48 190 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 TRAV12-3A0A0B4J271 114 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 UBE2E1P51965 193 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 CKS1BP61024 79 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 LINC01356Q8N9X3 169 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 VGLL1Q99990 258 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 CSTL1Q9H114 145 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 NDUFA4L2Q9NRX3 87 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 FNDC1Q4ZHG4 1894 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-208ENST00000553289 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-208ENST00000553289 IGFL3Q6UXB1 125 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 ZNF833PQ6ZTB9 187 aa9.34□□□□□ -0.91
SYNE2-208ENST00000553289 PHLDA1Q8WV24 401 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-208ENST00000553289 RNF166Q96A37 237 aaPredicted RBP9.34□□□□□ -0.91
SYNE2-208ENST00000553289 FCN3O75636 299 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 LINC00311Q8N616 119 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 TMEM158Q8WZ71 300 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 GNLYP22749 145 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 SAA4P35542 130 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 NSUN5P1Q3KNT7 163 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 S100A7L2Q5SY68 101 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 SFTA2Q6UW10 78 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 TRAV8-1A0A0A6YYK1 113 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 DLEU1O43261 78 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 NDPQ00604 133 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 BRD3OSQ6XYD6 125 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 WFDC12Q8WWY7 111 aa9.33□□□□□ -0.92
SYNE2-208ENST00000553289 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
SYNE2-208ENST00000553289 TRGV1A0A0A0MS02 117 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms