RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 LINC01548A6NM66 108 aa10.95□□□□□ -0.66
RAB3IP-216ENST00000552199 LTAP01374 205 aa10.95□□□□□ -0.66
RAB3IP-216ENST00000552199 BRD3OSQ6XYD6 125 aa10.95□□□□□ -0.66
RAB3IP-216ENST00000552199 CMTM2Q8TAZ6 248 aa10.95□□□□□ -0.66
RAB3IP-216ENST00000552199 PIFOQ8TCI5 191 aa10.95□□□□□ -0.66
RAB3IP-216ENST00000552199 ZNF414Q96IQ9 312 aa10.95□□□□□ -0.66
RAB3IP-216ENST00000552199 IZUMO1RA6ND01 250 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 SH2D7A6NKC9 451 aaPredicted RBP10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 CA1P00915 261 aaPredicted RBP10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 S100A12P80511 92 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 COX19Q49B96 90 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 PRR27Q6MZM9 219 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 ZNF502Q8TBZ5 544 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 PACRGQ96M98 296 aaPredicted RBP10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 MOB4Q9Y3A3 225 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 SPINK4O60575 86 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 AMBPP02760 352 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 MSMBP08118 114 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 RHOGP84095 191 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 C15orf32Q32M92 178 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 WDR73Q6P4I2 378 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 SIGLEC15Q6ZMC9 328 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 TMEM219Q86XT9 240 aa10.94□□□□□ -0.66
RAB3IP-216ENST00000552199 COL12A1Q99715 3063 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 TRBV6-1A0A0K0K1D8 114 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 SNURFLB1AK76 121 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 G3V318 75 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 PAX1P15863 534 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 DSCR9P59020 149 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 SLC35B1P78383 322 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 GOLT1AQ6ZVE7 132 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 ZNF843Q8N446 348 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
RAB3IP-216ENST00000552199 IGLV2-11P01706 119 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 MT-ND6P03923 174 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 IGHV4-38-2P0DP08 117 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 TMEM136Q6ZRR5 245 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 Q86TA4 180 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 NRGNQ92686 78 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 C19orf71A6NCJ1 209 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 AMY1AP04745 511 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 PDE6HQ13956 83 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 LINC00322Q6ZN03 302 aaPredicted RBP10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 TSKUQ8WUA8 353 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 RABAC1Q9UI14 185 aa10.92□□□□□ -0.66
RAB3IP-216ENST00000552199 CHD6Q8TD26 2715 aa10.91□□□□□ -0.66
RAB3IP-216ENST00000552199 GPR183P32249 361 aa10.91□□□□□ -0.66
RAB3IP-216ENST00000552199 MRPL54Q6P161 138 aaKnown RBP10.91□□□□□ -0.66
RAB3IP-216ENST00000552199 PRSS22Q9GZN4 317 aa10.91□□□□□ -0.66
RAB3IP-216ENST00000552199 NAT8BQ9UHF3 227 aa10.91□□□□□ -0.66
RAB3IP-216ENST00000552199 B4DSR2 109 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 CLEC3BP05452 202 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 COX6B1P14854 86 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 CRIP2P52943 208 aaPredicted RBP10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 SRSF1Q07955 248 aaKnown RBP eCLIP10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 PRNTQ86SH4 94 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 TMEM256Q8N2U0 113 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 GBGT1Q8N5D6 347 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 TMEM75Q8N9X5 138 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 TMEM18Q96B42 140 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 GSN-AS1Q9NRJ2 163 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 CSMD1Q96PZ7 3565 aa10.9□□□□□ -0.66
RAB3IP-216ENST00000552199 A0A1B0GUS0 222 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 GRIFINA4D1Z8 144 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 BMPR1BO00238 502 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 CRISP2P16562 243 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 S100A7P31151 101 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 C19orf54Q5BKX5 351 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 RASL11AQ6T310 242 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 WIPF2Q8TF74 440 aaPredicted RBP10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 EEF1AKMT3Q96AZ1 226 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 MS4A10Q96PG2 267 aa10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 RPP21Q9H633 154 aaKnown RBP10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 ZNF331Q9NQX6 463 aaPredicted RBP10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 SOX21Q9Y651 276 aaPredicted RBP10.9□□□□□ -0.67
RAB3IP-216ENST00000552199 MYO18BQ8IUG5 2567 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 TRAV41A0A0B4J266 112 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 K7EQM0 130 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 P01737 135 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 HLA-DQA1P01909 254 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 SLC25A16P16260 332 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 CT83Q5H943 113 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 DNLZQ5SXM8 178 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 CDPF1Q6NVV7 123 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 DAZAP1Q96EP5 407 aaKnown RBP10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 CCDC140Q96MF4 163 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 NEU1Q99519 415 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 AAMDCQ9H7C9 122 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 HIF1ANQ9NWT6 349 aa10.89□□□□□ -0.67
RAB3IP-216ENST00000552199 SPG11Q96JI7 2443 aa10.88□□□□□ -0.67
RAB3IP-216ENST00000552199 TRBV7-1A0A0A6YYK4 115 aa10.88□□□□□ -0.67
RAB3IP-216ENST00000552199 IGHV3-35A0A0C4DH35 117 aa10.88□□□□□ -0.67
RAB3IP-216ENST00000552199 A8MWL6 223 aa10.88□□□□□ -0.67
RAB3IP-216ENST00000552199 NUPR1O60356 82 aa10.88□□□□□ -0.67
RAB3IP-216ENST00000552199 RAB4BP61018 213 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms