RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 RPL7P18124 248 aaKnown RBP1.26□□□□□ -2.21
CCDC38-208ENST00000549876 RPS3P23396 243 aaKnown RBP eCLIP1.26□□□□□ -2.21
CCDC38-208ENST00000549876 FKBP2P26885 142 aaKnown RBP1.26□□□□□ -2.21
CCDC38-208ENST00000549876 SDC4P31431 198 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 S100A11P31949 105 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 KRTAP12-1P59990 96 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 CKS1BP61024 79 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 SPCS2Q15005 226 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 OR8B8Q15620 311 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 SMIM21Q3B7S5 101 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 MORN2Q502X0 79 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 EIF5AL1Q6IS14 154 aaKnown RBP1.26□□□□□ -2.21
CCDC38-208ENST00000549876 C7orf65Q6ZTY9 151 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 PHF5AQ7RTV0 110 aaKnown RBP1.26□□□□□ -2.21
CCDC38-208ENST00000549876 PDZD9Q8IXQ8 264 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 OR8I2Q8N0Y5 310 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 LINC00471Q8N535 108 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 SLC30A7Q8NEW0 376 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 ADAT1Q9BUB4 502 aaKnown RBP1.26□□□□□ -2.21
CCDC38-208ENST00000549876 CST9LQ9H4G1 147 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 TPT1P8Q9HAU6 139 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 BCL2L10Q9HD36 194 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 COPZ2Q9P299 210 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 HS3ST2Q9Y278 367 aa1.26□□□□□ -2.21
CCDC38-208ENST00000549876 ARHGEF28Q8N1W1 1705 aaKnown RBP1.26□□□□□ -2.21
CCDC38-208ENST00000549876 OVOS2A0A0G2JMS6 1433 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 ANKRD31Q8N7Z5 1873 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 IGKV1D-42A0A075B6H8 117 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 IGHV1-58A0A0C4DH39 117 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 TRBV7-6A0A0J9YX20 115 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 A8MWV9 139 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 F8W036 122 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 H7BYZ3 331 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 HIST1H2BKO60814 126 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 LYZL6O75951 148 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 DPM2O94777 84 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 HIST1H2BJP06899 126 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 SDC2P34741 201 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 RPL35P42766 123 aaKnown RBP1.25□□□□□ -2.21
CCDC38-208ENST00000549876 PSPHP78330 225 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 RHOGP84095 191 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 ELOBQ15370 118 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 MSMO1Q15800 293 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 ESRGQ1W209 222 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 SOSTDC1Q6X4U4 206 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 OR5D16Q8NGK9 328 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 MAGOHBQ96A72 148 aaKnown RBP1.25□□□□□ -2.21
CCDC38-208ENST00000549876 CARD19Q96LW7 228 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 MCEEQ96PE7 176 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 NPCDR1Q9BY65 106 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 TMEM106BQ9NUM4 274 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 NAT8BQ9UHF3 227 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 PTPRBP23467 1997 aa1.25□□□□□ -2.21
CCDC38-208ENST00000549876 A2MP01023 1474 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 WDR7Q9Y4E6 1490 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 SBF1O95248 1867 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 CCDC88AQ3V6T2 1871 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 NUP98P52948 1817 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 STRCQ7RTU9 1775 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 CUL9Q8IWT3 2517 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 CCDC88CQ9P219 2028 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 GABARAPH6UMI1 98 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 TIMM17BO60830 172 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 SULT1C4O75897 302 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 OR2H2O95918 312 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 MPC1LP0DKB6 136 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 EVI2AP22794 236 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 CMPK1P30085 196 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 TMBIM6P55061 237 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 HBBP68871 147 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 ZNF846Q147U1 533 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 Q1T7F1 81 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 VMA21Q3ZAQ7 101 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 TCTE3Q8IZS6 198 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 OR8J3Q8NGG0 315 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 RNASE11Q8TAA1 199 aaKnown RBP1.24□□□□□ -2.21
CCDC38-208ENST00000549876 C1orf54Q8WWF1 131 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 SLC50A1Q9BRV3 221 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 C14orf132Q9NPU4 83 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 OTORQ9NRC9 128 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 HSPB8Q9UJY1 196 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 TRAPPC2LQ9UL33 140 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 TRPM1Q7Z4N2 1603 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 GLI3P10071 1580 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 ARHGEF11O15085 1522 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 CEP164Q9UPV0 1460 aa1.24□□□□□ -2.21
CCDC38-208ENST00000549876 FANCMQ8IYD8 2048 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 PLXNA3P51805 1871 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 FER1L6Q2WGJ9 1857 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 TRAV1-1A0A0B4J248 108 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 LOC107984640A0A0U1RRK4 108 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 C9JAW5 83 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 NDUFA2O43678 99 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 TPST1O60507 370 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 PROSCO94903 275 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 TNFSF15O95150 251 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 CXCL1P09341 107 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 UBBP0CG47 229 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 FABP2P12104 132 aa1.23□□□□□ -2.21
CCDC38-208ENST00000549876 ARPP19P56211 112 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms