RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CHST6Q9GZX3 395 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 PBOV1Q9GZY1 135 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 TUBA4BQ9H853 241 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 GPR84Q9NQS5 396 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 CMC2Q9NRP2 79 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 CMTM6Q9NX76 183 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 IL20Q9NYY1 176 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 LINC00527Q9UJ94 153 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 ERGIC3Q9Y282 383 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 V9GYQ6 96 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 TGP01266 2768 aa2.19□□□□□ -2.06
PTCH1-216ENST00000548379 IGHV3OR16-8A0A075B7F1 116 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 PQLC2LA1A4F0 135 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 FAM183AA6NL82 134 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 ZNF729A6NN14 1252 aaPredicted RBP2.18□□□□□ -2.06
PTCH1-216ENST00000548379 H3BSH0 61 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 LGALS9O00182 355 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 GNGT2O14610 69 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 OVOL1O14753 267 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 ZNF737O75373 536 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 SOX14O95416 240 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 ATP6V1G2O95670 118 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 IGKV1D-33P01593 117 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 IGKV1-33P01594 117 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 IGHG2P01859 326 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 HMGN1P05114 100 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 COX4I1P13073 169 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 NTF3P20783 257 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 PSMB9P28065 219 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 RBP2P50120 134 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 GNG10P50151 68 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 PSME3P61289 254 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 DEFB136Q30KP8 78 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 LDLRAD2Q5SZI1 272 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 LAMTOR1Q6IAA8 161 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 SLC25A26Q70HW3 274 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 ANGPTL5Q86XS5 388 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 LYPD6Q86Y78 171 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 LYPD1Q8N2G4 141 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 MIR7-3HGQ8N6C7 128 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 LINC00337Q8N6G1 96 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 SLC25A29Q8N8R3 303 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 OR2T10Q8NGZ9 312 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 CPNE2Q96FN4 548 aaPredicted RBP2.18□□□□□ -2.06
PTCH1-216ENST00000548379 MRPL48Q96GC5 212 aaKnown RBP2.18□□□□□ -2.06
PTCH1-216ENST00000548379 SMIM8Q96KF7 97 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 SPACA5Q96QH8 159 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 YIPF3Q9GZM5 350 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 ABCG5Q9H222 651 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 RHOFQ9HBH0 211 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 ZNF286AQ9HBT8 521 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 HES4Q9HCC6 221 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 SAR1AQ9NR31 198 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 FGFR1OP2Q9NVK5 253 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 ARMC1Q9NVT9 282 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 FAM206AQ9NX38 181 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 COMMD9Q9P000 198 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 PRO0628Q9UI54 55 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 HHLA2Q9UM44 414 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 PKD1L1Q8TDX9 2849 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 NBEAL2Q6ZNJ1 2754 aa2.18□□□□□ -2.06
PTCH1-216ENST00000548379 PRKDCP78527 4128 aaKnown RBP2.17□□□□□ -2.06
PTCH1-216ENST00000548379 MEIKINA0A087WXM9 373 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 A0A1B0GXF2 115 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 ODAMA1E959 279 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 A6NIN4 97 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 ZNF670-ZNF695F2Z2N8 137 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 H0Y980 276 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 DEGS1O15121 323 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 ENTPD6O75354 484 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 CNIH1O95406 144 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 LY6G6CO95867 125 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 OR2H2O95918 312 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 FAM107AO95990 144 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 CD5P06127 495 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 CDK1P06493 297 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 SPNP16150 400 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 ALOX5APP20292 161 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 CD34P28906 385 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 PRSS3P35030 304 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 LGALS7P47929 136 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 PSMD7P51665 324 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 CLDN12P56749 244 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 AESQ08117 197 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 APOFQ13790 326 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 LTC4SQ16873 150 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 SP6Q3SY56 376 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 ACTBL2Q562R1 376 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 LINC01590Q5TEZ4 76 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 TMEM42Q69YG0 159 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 SLC25A34Q6PIV7 304 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 YIPF7Q8N8F6 280 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 OR8D4Q8NGM9 314 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 PP6455Q8WZ26 134 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 KCTD7Q96MP8 289 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 AMELYQ99218 206 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 TM2D3Q9BRN9 247 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 FAAP24Q9BTP7 215 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 CST11Q9H112 138 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms