RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 Q9UFV3 132 aa10.53□□□□□ -0.72
UBE3B-209ENST00000539584 H3BRN7 92 aa10.52□□□□□ -0.73
UBE3B-209ENST00000539584 OVOL3O00110 214 aa10.52□□□□□ -0.73
UBE3B-209ENST00000539584 NUDT3O95989 172 aa10.52□□□□□ -0.73
UBE3B-209ENST00000539584 THBDP07204 575 aa10.52□□□□□ -0.73
UBE3B-209ENST00000539584 CDKN1BP46527 198 aa10.52□□□□□ -0.73
UBE3B-209ENST00000539584 PSG3Q16557 428 aa10.52□□□□□ -0.73
UBE3B-209ENST00000539584 IGHV3-72A0A0B4J1Y9 119 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 VAMP3Q15836 100 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 FA2HQ7L5A8 372 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 TMUB1Q9BVT8 246 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 RAB1BQ9H0U4 201 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 PSG8Q9UQ74 426 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 hDV102S1A0JD36 115 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 M0QZ24 198 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 IGKV1-17P01599 117 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 CT45A10P0DMU9 189 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 COX8AP10176 69 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 RBX1P62877 108 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 PLGLAQ15195 96 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 RPEQ96AT9 228 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 ZNF747Q9BV97 191 aa10.51□□□□□ -0.73
UBE3B-209ENST00000539584 LOC105371242A0A075B767 164 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 TRAV8-1A0A0A6YYK1 113 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 B9A039 149 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 TAX1BP3O14907 124 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 LINC00173Q6ZV60 143 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 COX8CQ7Z4L0 72 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 EXOC3-AS1Q8N2X6 119 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 OR1N2Q8NGR9 330 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 PRSS3P2Q8NHM4 247 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 ZC2HC1AQ96GY0 325 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 APOBEC3AP31941 199 aaPredicted RBP10.5□□□□□ -0.73
UBE3B-209ENST00000539584 SEC11AP67812 179 aa10.5□□□□□ -0.73
UBE3B-209ENST00000539584 ZNF48Q96MX3 618 aaPredicted RBP10.5□□□□□ -0.73
UBE3B-209ENST00000539584 NCOR1O75376 2440 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 H3BTX0 84 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 ARMS2P0C7Q2 107 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 CNTFRP26992 372 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 SAPCD1Q5SSQ6 148 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 PRSS33Q8NF86 280 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 RNASE8Q8TDE3 154 aaKnown RBP10.49□□□□□ -0.73
UBE3B-209ENST00000539584 NPFFR1Q9GZQ6 430 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 AAMDCQ9H7C9 122 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 PLCE1Q9P212 2302 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 U3KQK5 164 aa10.49□□□□□ -0.73
UBE3B-209ENST00000539584 IGHV3-21A0A0B4J1V1 117 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 LY6LH3BQJ8 138 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 K7EIM0 57 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 CD24P25063 80 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 GPR183P32249 361 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 ZNF491Q8N8L2 437 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 RNF125Q96EQ8 232 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 FBXL15Q9H469 300 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 PEF1Q9UBV8 284 aaKnown RBP10.48□□□□□ -0.73
UBE3B-209ENST00000539584 WI2-2373I1.2A0A1W2PRP0 233 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 ZNF785A8K8V0 405 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 MRPS12O15235 138 aaKnown RBP10.48□□□□□ -0.73
UBE3B-209ENST00000539584 S100A7P31151 101 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 PSG9Q00887 426 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 ZNF414Q96IQ9 312 aa10.48□□□□□ -0.73
UBE3B-209ENST00000539584 E7EQL1 145 aa10.47□□□□□ -0.73
UBE3B-209ENST00000539584 CNIH1O95406 144 aa10.47□□□□□ -0.73
UBE3B-209ENST00000539584 LHFPL4Q7Z7J7 247 aa10.47□□□□□ -0.73
UBE3B-209ENST00000539584 NAV3Q8IVL0 2385 aa10.47□□□□□ -0.73
UBE3B-209ENST00000539584 PPIAL4CA0A0B4J2A2 164 aa10.46□□□□□ -0.73
UBE3B-209ENST00000539584 SIVA1O15304 175 aa10.46□□□□□ -0.73
UBE3B-209ENST00000539584 SCGB2A1O75556 95 aa10.46□□□□□ -0.73
UBE3B-209ENST00000539584 PPBPP02775 128 aa10.46□□□□□ -0.73
UBE3B-209ENST00000539584 PPIAL4GP0DN37 164 aa10.46□□□□□ -0.73
UBE3B-209ENST00000539584 ARF6P62330 175 aa10.46□□□□□ -0.73
UBE3B-209ENST00000539584 MUC21A0A0G2JKD1 596 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 MUC21A0A140T8X8 626 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 CSN3P07498 182 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 APELAP0DMC3 54 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 ZNF138P52744 262 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 MUC21Q5SSG8 566 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 FAM104BQ5XKR9 115 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 Q6ZVH6 145 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 ORMDL3Q8N138 153 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 NPBQ8NG41 125 aa10.46□□□□□ -0.74
UBE3B-209ENST00000539584 TMEM189A5PLL7 270 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 IL4P05112 153 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 CRIP1P50238 77 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 SRSF2Q01130 221 aaKnown RBP10.45□□□□□ -0.74
UBE3B-209ENST00000539584 NBR2O15453 112 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 NDUFA3O95167 84 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 CEACAM3P40198 252 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 OR9G4Q8NGQ1 327 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 IGFBPL1Q8WX77 278 aa10.45□□□□□ -0.74
UBE3B-209ENST00000539584 NPIPB5A8MRT5 1133 aa10.44□□□□□ -0.74
UBE3B-209ENST00000539584 FCGR2BP31994 310 aaPredicted RBP10.44□□□□□ -0.74
UBE3B-209ENST00000539584 BMI1P35226 326 aa10.44□□□□□ -0.74
UBE3B-209ENST00000539584 MFAP4P55083 255 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms