RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 TRGV9Q99603 122 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 LY6HO94772 140 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 LCN12Q6JVE5 192 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 NUP35Q8NFH5 326 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 DOCK7Q96N67 2140 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 DPH3P1Q9H4G8 78 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 D6R8Y8 96 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 PPBPP02775 128 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 LDLRAD2Q5SZI1 272 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 SIGLEC15Q6ZMC9 328 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 C5orf30Q96GV9 206 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 PROK2Q9HC23 129 aa11.83□□□□□ -0.52
CACNB1-206ENST00000539338 CREBBPQ92793 2442 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 ETV2O00321 342 aaPredicted RBP11.82□□□□□ -0.52
CACNB1-206ENST00000539338 DNAL4O96015 105 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 IGFL4Q6B9Z1 124 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 Q8TAT8 98 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 RNASE2P10153 161 aaKnown RBP11.82□□□□□ -0.52
CACNB1-206ENST00000539338 LYZL1Q6UWQ5 148 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 LINC00479Q96M42 142 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 TRAV41A0A0B4J266 112 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 EREGO14944 169 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
CACNB1-206ENST00000539338 SPTAN1Q13813 2472 aaKnown RBP11.82□□□□□ -0.52
CACNB1-206ENST00000539338 DEFB104AQ8WTQ1 72 aa11.81□□□□□ -0.52
CACNB1-206ENST00000539338 SIGLEC9Q9Y336 463 aa11.81□□□□□ -0.52
CACNB1-206ENST00000539338 DIDO1Q9BTC0 2240 aaKnown RBP11.81□□□□□ -0.52
CACNB1-206ENST00000539338 PLXNA4Q9HCM2 1894 aa11.81□□□□□ -0.52
CACNB1-206ENST00000539338 BUB1B-PAK6H3BSN5 160 aa11.81□□□□□ -0.52
CACNB1-206ENST00000539338 PSMG4Q5JS54 123 aa11.81□□□□□ -0.52
CACNB1-206ENST00000539338 VCX2Q9H322 139 aa11.81□□□□□ -0.52
CACNB1-206ENST00000539338 SAP30O75446 220 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 TTC28Q96AY4 2481 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 ANAPC10Q9UM13 185 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 TRGV2A0A075B6R0 118 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 F2Z2F3 143 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 IGKCP01834 107 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 C1orf194Q5T5A4 169 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 PLXND1Q9Y4D7 1925 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 LY6G6EA0A0G2JKS1 128 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 COL8A2P25067 703 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 NDPQ00604 133 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 CYSLTR1Q9Y271 337 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 U3KQA8 63 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 CADP27708 2225 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 H3BRM9 83 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 IFI27P40305 119 aaPredicted RBP11.8□□□□□ -0.52
CACNB1-206ENST00000539338 ZNF843Q8N446 348 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 FAM110DQ8TAY7 271 aaPredicted RBP11.8□□□□□ -0.52
CACNB1-206ENST00000539338 VOPP1Q96AW1 172 aa11.8□□□□□ -0.52
CACNB1-206ENST00000539338 ZNF503-AS2A6NEH8 195 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 C3orf79P0CE67 100 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 ZNF138P52744 262 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 C5orf64Q2M2E5 130 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 C11orf44Q8N8P7 122 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 WNK2Q9Y3S1 2297 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 ABCA1O95477 2261 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 PAX9P55771 341 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 CHTOPQ9Y3Y2 248 aaKnown RBP11.79□□□□□ -0.52
CACNB1-206ENST00000539338 hDV102S1A0JD36 115 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 RSPO1Q2MKA7 263 aaPredicted RBP11.79□□□□□ -0.52
CACNB1-206ENST00000539338 ORMDL2Q53FV1 153 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 BRD3OSQ6XYD6 125 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 FAM169BQ8N8A8 192 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 LY96Q9Y6Y9 160 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 MEGF9Q9H1U4 602 aa11.79□□□□□ -0.52
CACNB1-206ENST00000539338 MRPS16Q9Y3D3 137 aaKnown RBP11.79□□□□□ -0.52
CACNB1-206ENST00000539338 NAA38Q9BRA0 125 aaKnown RBP11.78□□□□□ -0.52
CACNB1-206ENST00000539338 TICRRQ7Z2Z1 1910 aa11.78□□□□□ -0.52
CACNB1-206ENST00000539338 SH2D1AO60880 128 aa11.78□□□□□ -0.52
CACNB1-206ENST00000539338 ZNF329Q86UD4 541 aa11.78□□□□□ -0.52
CACNB1-206ENST00000539338 RPRMLQ8N4K4 120 aa11.78□□□□□ -0.52
CACNB1-206ENST00000539338 OVOL1O14753 267 aa11.78□□□□□ -0.52
CACNB1-206ENST00000539338 CD300EQ496F6 205 aaPredicted RBP11.78□□□□□ -0.52
CACNB1-206ENST00000539338 TDGF1P13385 188 aa11.77□□□□□ -0.52
CACNB1-206ENST00000539338 WDR86Q86TI4 376 aa11.77□□□□□ -0.52
CACNB1-206ENST00000539338 IGHV3-64A0A075B6Q5 118 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 ZNF815PA8K554 130 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 TSPAN13O95857 204 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 RASL11AQ6T310 242 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 RNF5Q99942 180 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 BPESC1Q9GZL8 116 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 IGKV1-39P01597 117 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 IGKV1D-39P04432 117 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 WIPF3A6NGB9 483 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 Q6ZR03 302 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 STHQ8IWL8 128 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 ZNF664Q8N3J9 261 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 DOCK9Q9BZ29 2069 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 USF3Q68DE3 2245 aa11.77□□□□□ -0.53
CACNB1-206ENST00000539338 FRMPD3Q5JV73 1810 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 DUSP14O95147 198 aaKnown RBP11.76□□□□□ -0.53
CACNB1-206ENST00000539338 PSG3Q16557 428 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 ANAPC1Q9H1A4 1944 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 A0A1W2PPI3 338 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 PLA2G2AP14555 144 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 PLXNA2O75051 1894 aa11.76□□□□□ -0.53
CACNB1-206ENST00000539338 OOSP1A8MZH6 123 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms